RNA–Protein interactions for RNA: ENST00000428621.5

CLHC1-207, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 2

Gene CLHC1, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-207ENST00000428621 QKIQ96PU8 341 aaKnown RBP eCLIP8.36□□□□□ -1.072e-12■■■□□ 17.6
CLHC1-207ENST00000428621 TSPAN18Q96SJ8 248 aa8.36□□□□□ -1.07
CLHC1-207ENST00000428621 MYCBPQ99417 103 aaPredicted RBP8.36□□□□□ -1.07
CLHC1-207ENST00000428621 MRPL45Q9BRJ2 306 aaKnown RBP8.36□□□□□ -1.07
CLHC1-207ENST00000428621 TUBB6Q9BUF5 446 aa8.36□□□□□ -1.07
CLHC1-207ENST00000428621 TSSK1BQ9BXA7 367 aa8.36□□□□□ -1.07
CLHC1-207ENST00000428621 TUT1Q9H6E5 874 aaKnown RBP8.36□□□□□ -1.07
CLHC1-207ENST00000428621 NRDE2Q9H7Z3 1164 aa8.36□□□□□ -1.07
CLHC1-207ENST00000428621 XAB2Q9HCS7 855 aaKnown RBP8.36□□□□□ -1.07
CLHC1-207ENST00000428621 NPHS2Q9NP85 383 aa8.36□□□□□ -1.07
CLHC1-207ENST00000428621 GEMIN8Q9NWZ8 242 aaKnown RBP8.36□□□□□ -1.07
CLHC1-207ENST00000428621 RCOR3Q9P2K3 495 aaPredicted RBP8.36□□□□□ -1.07
CLHC1-207ENST00000428621 ZC3H7BQ9UGR2 993 aaKnown RBP8.36□□□□□ -1.07
CLHC1-207ENST00000428621 ZFP69BQ9UJL9 534 aa8.36□□□□□ -1.07
CLHC1-207ENST00000428621 TRIM33Q9UPN9 1127 aa8.36□□□□□ -1.07
CLHC1-207ENST00000428621 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.36□□□□□ -1.07
CLHC1-207ENST00000428621 C15orf41Q9Y2V0 281 aa8.36□□□□□ -1.07
CLHC1-207ENST00000428621 SLC45A1Q9Y2W3 748 aa8.36□□□□□ -1.07
CLHC1-207ENST00000428621 CITO14578 2027 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 EVPLQ92817 2033 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 E7ENQ6 273 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 GRAP2O75791 330 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 APOEP02649 317 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 SNRPAP09012 282 aaKnown RBP8.35□□□□□ -1.07
CLHC1-207ENST00000428621 CYP2F1P24903 491 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 ELF1P32519 619 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 RGS7P49802 495 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 CDK18Q07002 472 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 BST2Q10589 180 aaKnown RBP8.35□□□□□ -1.07
CLHC1-207ENST00000428621 SEMA5AQ13591 1074 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 DBN1Q16643 649 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 RAB6CQ53S08 254 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 PLEKHG4Q58EX7 1191 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 GJC2Q5T442 439 aaPredicted RBP8.35□□□□□ -1.07
CLHC1-207ENST00000428621 CYS1Q717R9 158 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 CAND1Q86VP6 1230 aaKnown RBP8.35□□□□□ -1.07
CLHC1-207ENST00000428621 PSTKQ8IV42 348 aaKnown RBP8.35□□□□□ -1.07
CLHC1-207ENST00000428621 TRIM42Q8IWZ5 723 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 TAB3Q8N5C8 712 aaPredicted RBP8.35□□□□□ -1.07
CLHC1-207ENST00000428621 PTPRN2Q92932 1015 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 STAMBPL1Q96FJ0 436 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 PPP1R16BQ96T49 567 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 DNAI2Q9GZS0 605 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 RAB6CQ9H0N0 254 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 PLAC1Q9HBJ0 212 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.35□□□□□ -1.07
CLHC1-207ENST00000428621 KANSL3Q9P2N6 904 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 STK38LQ9Y2H1 464 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 MTO1Q9Y2Z2 717 aaKnown RBP8.35□□□□□ -1.07
CLHC1-207ENST00000428621 HEY1Q9Y5J3 304 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 SNX9Q9Y5X1 595 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 PLXNB2O15031 1838 aa8.35□□□□□ -1.07
CLHC1-207ENST00000428621 SF3B1O75533 1304 aaKnown RBP eCLIP8.35□□□□□ -1.072e-11■■■■■ 167.1
CLHC1-207ENST00000428621 RRN3P2A6NIE6 340 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 SLC15A5A6NIM6 579 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 A6NJR5 290 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 UNCXA6NJT0 531 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 FAM159BA6NKW6 160 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 GOLGA8RI6L899 631 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 COPEO14579 308 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 STRNO43815 780 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 ZNF189O75820 626 aaPredicted RBP8.34□□□□□ -1.07
CLHC1-207ENST00000428621 KRT38O76015 456 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 APRTP07741 180 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 MMP3P08254 477 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 CNTFP26441 200 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 PTPN4P29074 926 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 HOXA11P31270 313 aaPredicted RBP8.34□□□□□ -1.07
CLHC1-207ENST00000428621 ADCYAP1R1P41586 468 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 ACADSBP45954 432 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 SERPINB4P48594 390 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 SERPINB9P50453 376 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 CDK16Q00536 496 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 MTM1Q13496 603 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 TTLL12Q14166 644 aaPredicted RBP8.34□□□□□ -1.07
CLHC1-207ENST00000428621 R3HDM1Q15032 1099 aaKnown RBP8.34□□□□□ -1.07
CLHC1-207ENST00000428621 CA9Q16790 459 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 TAF1BQ53T94 588 aaPredicted RBP8.34□□□□□ -1.07
CLHC1-207ENST00000428621 WASHC2DQ5SRD0 308 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 LDLRAD1Q5T700 205 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 SCYL2Q6P3W7 929 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 NOTUMQ6P988 496 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 USP50Q70EL3 339 aaPredicted RBP8.34□□□□□ -1.07
CLHC1-207ENST00000428621 MOB2Q70IA6 237 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 ZNF534Q76KX8 674 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 STRADAQ7RTN6 431 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 ACOT1Q86TX2 421 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 HACE1Q8IYU2 909 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 ANKRD52Q8NB46 1076 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 GSDMBQ8TAX9 411 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 SKA1Q96BD8 255 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 C7orf26Q96N11 449 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 ZMAT2Q96NC0 199 aaKnown RBP8.34□□□□□ -1.07
CLHC1-207ENST00000428621 OLFM3Q96PB7 478 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 FAM111AQ96PZ2 611 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 SRPK1Q96SB4 655 aaKnown RBP8.34□□□□□ -1.07
CLHC1-207ENST00000428621 ADAM33Q9BZ11 813 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 IQCGQ9H095 443 aaKnown RBP8.34□□□□□ -1.07
CLHC1-207ENST00000428621 ADAMTS10Q9H324 1103 aa8.34□□□□□ -1.07
CLHC1-207ENST00000428621 FAM49BQ9NUQ9 324 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms