RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 RPF1Q9H9Y2 349 aaKnown RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 ITGA11Q9UKX5 1188 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 INO80B-WBP1J3KQ70 363 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 OATP04181 439 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 CD48P09326 243 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 YWHAZP63104 245 aaKnown RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 CLDN10P78369 228 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 TCHHL1Q5QJ38 904 aaPredicted RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 NXNQ6DKJ4 435 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 IGDCC3Q8IVU1 814 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 TRIML2Q8N7C3 387 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 INO80BQ9C086 356 aaPredicted RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 DHX33Q9H6R0 707 aaKnown RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 SLC38A10Q9HBR0 1119 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 CHCHD3Q9NX63 227 aaKnown RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 SIRPGQ9P1W8 387 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 FAF1Q9UNN5 650 aaPredicted RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 CNTN6Q9UQ52 1028 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 TRUB2O95900 331 aaKnown RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 CST3P01034 146 aaPredicted RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 SUPT20HL2P0C7V6 817 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 ZFXP17010 805 aaPredicted RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 ZNF252P-AS1Q0IIN9 211 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 SLC5A9Q2M3M2 681 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 SUPT20HL1Q3ZLR7 823 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 SNRNP48Q6IEG0 339 aaKnown RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 ABTB1Q969K4 478 aaPredicted RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 GCNAQ96QF7 691 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 PORCNQ9H237 461 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 PNPLA8Q9NP80 782 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 HESX1Q9UBX0 185 aa11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 G3BP2Q9UN86 482 aaKnown RBP11.13□□□□□ -0.63
ATP2C1-204ENST00000428331 ATP6V1B1P15313 513 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 AOC1P19801 751 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 KCNA4P22459 653 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 RBL1P28749 1068 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 C16orf89Q6UX73 402 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 ZPBP2Q6X784 338 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 DDI1Q8WTU0 396 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 MZB1Q8WU39 189 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 GFM2Q969S9 779 aaKnown RBP11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 BTBD9Q96Q07 612 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 ETNK2Q9NVF9 386 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 AIM2O14862 343 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 MAP3K6O95382 1288 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 PGM3O95394 542 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 RALBP11234 206 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 IL1R2P27930 398 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 TGFB2P61812 414 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 MMRN1Q13201 1228 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 C16orf46Q6P387 395 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 CDHR3Q6ZTQ4 885 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 RAPH1Q70E73 1250 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 CMASQ8NFW8 434 aaPredicted RBP11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 ACMSDQ8TDX5 336 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 DNAI2Q9GZS0 605 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 hCG_2014768A0A024R1R8 64 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 E5RJQ4 531 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 TGM2P21980 687 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 ZBTB41Q5SVQ8 909 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 OLFML2BQ68BL8 750 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 KLC3Q6P597 504 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 B3GNT6Q6ZMB0 384 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 RXFP2Q8WXD0 754 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 LZICQ8WZA0 190 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 ZFRQ96KR1 1074 aaKnown RBP11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 RNF157Q96PX1 679 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 EBF4Q9BQW3 602 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 HAUS8Q9BT25 410 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 LHX5Q9H2C1 402 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 RPAP3Q9H6T3 665 aaPredicted RBP11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 ZNF395Q9H8N7 513 aaPredicted RBP11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 SSX2IPQ9Y2D8 614 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 KAT6AQ92794 2004 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 CAPN14A8MX76 684 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 NOP56O00567 594 aaKnown RBP11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 PRKCBP05771 671 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 FAM200BP0CF97 657 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 GABRB2P47870 512 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 SESN2P58004 480 aaPredicted RBP11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 SLC25A11Q02978 314 aaKnown RBP11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 FOLH1Q04609 750 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 TMED1Q13445 227 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 PDSS2Q86YH6 399 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 ZNF276Q8N554 614 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 EBNA1BP2Q99848 306 aaKnown RBP11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 VPS33BQ9H267 617 aa11.12□□□□□ -0.63
ATP2C1-204ENST00000428331 RNASEH1O60930 286 aaKnown RBP11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 PABPC4LP0CB38 370 aaKnown RBP11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 THRAP10827 490 aa11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 HSPA13P48723 471 aa11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 PTPN11Q06124 597 aaPredicted RBP11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 FLOT2Q14254 428 aa11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 STXBP2Q15833 593 aa11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 TRIM50Q86XT4 487 aa11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 TFAP2BQ92481 460 aa11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 TMEM134Q9H6X4 195 aa11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 CNTN3Q9P232 1028 aa11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 PTPRJQ12913 1337 aa11.11□□□□□ -0.63
ATP2C1-204ENST00000428331 DCXO43602 365 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms