RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 MDM4O15151 490 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 MSI1O43347 362 aaKnown RBP12.58□□□□□ -0.4
RFC4-206ENST00000427785 LPXNO60711 386 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 RB1P06400 928 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 KRT7P08729 469 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 RARAP10276 462 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 KLRC2P26717 231 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 PAFAH1B1P43034 410 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 DEUP1Q05D60 604 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 CAMK1Q14012 370 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 VEPH1Q14D04 833 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 RAB30Q15771 203 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 CA9Q16790 459 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 ZC3H12AQ5D1E8 599 aaKnown RBP12.58□□□□□ -0.4
RFC4-206ENST00000427785 MFSD7Q6UXD7 560 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 STRADAQ7RTN6 431 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 EXD1Q8NHP7 514 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 ACTRT1Q8TDG2 376 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 MICAL1Q8TDZ2 1067 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 RAPGEF5Q92565 580 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 CENPIQ92674 756 aaPredicted RBP12.58□□□□□ -0.4
RFC4-206ENST00000427785 RBM41Q96IZ5 413 aaKnown RBP12.58□□□□□ -0.4
RFC4-206ENST00000427785 TRIM62Q9BVG3 475 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 TTLL2Q9BWV7 592 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 AP1M1Q9BXS5 423 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 TMPRSS4Q9NRS4 437 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 PIGVQ9NUD9 493 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.58□□□□□ -0.4
RFC4-206ENST00000427785 DDX56Q9NY93 547 aaKnown RBP12.58□□□□□ -0.4
RFC4-206ENST00000427785 IL37Q9NZH6 218 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 HSFX1Q9UBD0 423 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 MSRAQ9UJ68 235 aa12.58□□□□□ -0.4
RFC4-206ENST00000427785 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.57□□□□□ -0.4
RFC4-206ENST00000427785 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.57□□□□□ -0.4
RFC4-206ENST00000427785 TCRBV7S2A1N4TA0A589 114 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 FAM92AA1XBS5 289 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 EPOPA6NHQ4 379 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 IRAK2O43187 625 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 GLUD1P00367 558 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 C8AP07357 584 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 CD48P09326 243 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 RALAP11233 206 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 HMGA1P17096 107 aaKnown RBP12.57□□□□□ -0.4
RFC4-206ENST00000427785 ALDH1A3P47895 512 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 LONRF2Q1L5Z9 754 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 ODF2Q5BJF6 829 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 KAZNQ674X7 775 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 SPOCD1Q6ZMY3 1216 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 RSRC2Q7L4I2 434 aaKnown RBP12.57□□□□□ -0.4
RFC4-206ENST00000427785 ZNF572Q7Z3I7 529 aaPredicted RBP12.57□□□□□ -0.4
RFC4-206ENST00000427785 BNIPLQ7Z465 357 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 SLC13A5Q86YT5 568 aaPredicted RBP12.57□□□□□ -0.4
RFC4-206ENST00000427785 TCEAL8Q8IYN2 117 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 ARHGAP18Q8N392 663 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 MRPL43Q8N983 215 aaKnown RBP12.57□□□□□ -0.4
RFC4-206ENST00000427785 NOA1Q8NC60 698 aaKnown RBP12.57□□□□□ -0.4
RFC4-206ENST00000427785 MYRIPQ8NFW9 859 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 RNF139Q8WU17 664 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 ARNTL2Q8WYA1 636 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 CASP10Q92851 521 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 NT5C3BQ969T7 300 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 SMOC2Q9H3U7 446 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 ZNF334Q9HCZ1 680 aaPredicted RBP12.57□□□□□ -0.4
RFC4-206ENST00000427785 TLR8Q9NR97 1041 aaKnown RBP12.57□□□□□ -0.4
RFC4-206ENST00000427785 ABCC13Q9NSE7 274 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 RBM12Q9NTZ6 932 aaKnown RBP12.57□□□□□ -0.4
RFC4-206ENST00000427785 COMMD8Q9NX08 183 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 SFMBT1Q9UHJ3 866 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 AP4E1Q9UPM8 1137 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 IRAK3Q9Y616 596 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 NUP205Q92621 2012 aa12.57□□□□□ -0.4
RFC4-206ENST00000427785 C3orf70A6NLC5 250 aaPredicted RBP12.56□□□□□ -0.4
RFC4-206ENST00000427785 H3BNC9 293 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 IGLV3-25P01717 112 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 CSH1P0DML2 217 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 CSH2P0DML3 217 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 RARGP13631 454 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 KRT10P13645 584 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 EPHB3P54753 998 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 CDH6P55285 790 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 MMRN1Q13201 1228 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 KRT81Q14533 505 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 TAF12Q16514 161 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 MSANTD2Q6P1R3 559 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 ADGRD2Q7Z7M1 963 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 MON1AQ86VX9 555 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 TDHQ8IZJ6 230 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 KREMEN2Q8NCW0 462 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 SPATA4Q8NEY3 305 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 UBE2Q2Q8WVN8 375 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 TEKT4Q8WW24 435 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 ZNF512Q96ME7 567 aaPredicted RBP12.56□□□□□ -0.4
RFC4-206ENST00000427785 KCTD15Q96SI1 283 aaPredicted RBP12.56□□□□□ -0.4
RFC4-206ENST00000427785 NCAPGQ9BPX3 1015 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 HEMGNQ9BXL5 484 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 DHX35Q9H5Z1 703 aaKnown RBP12.56□□□□□ -0.4
RFC4-206ENST00000427785 WDR6Q9NNW5 1121 aaKnown RBP12.56□□□□□ -0.4
RFC4-206ENST00000427785 RRN3Q9NYV6 651 aa12.56□□□□□ -0.4
RFC4-206ENST00000427785 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.56□□□□□ -0.4
RFC4-206ENST00000427785 RNF14Q9UBS8 474 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms