RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TSC22D2O75157 780 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 TADA3O75528 432 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 HLA-DQA2P01906 255 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 GSTM1P09488 218 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 IL1R1P14778 569 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 SPRP35270 261 aaPredicted RBP5.91□□□□□ -1.46
HERC4-206ENST00000427635 HNMTP50135 292 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 RPP38P78345 283 aaKnown RBP5.91□□□□□ -1.46
HERC4-206ENST00000427635 NFKB2Q00653 900 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 STX4Q12846 297 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 CUL3Q13618 768 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 SUZ12Q15022 739 aaKnown RBP5.91□□□□□ -1.46
HERC4-206ENST00000427635 NFRKBQ6P4R8 1299 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 FRMD5Q7Z6J6 570 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 TNS4Q8IZW8 715 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 CNPY3Q9BT09 278 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 SLITRK2Q9H156 845 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 BCL2L12Q9HB09 334 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 CLIC5Q9NZA1 410 aa5.91□□□□□ -1.46
HERC4-206ENST00000427635 ARHGEF12Q9NZN5 1544 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 TSPAN6O43657 245 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 SCGB1D2O95969 90 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 F9P00740 461 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 NR1D1P20393 614 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 CASP6P55212 293 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 PWP1Q13610 501 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 SPIDRQ14159 915 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 FSCN1Q16658 493 aaKnown RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 KCTD16Q68DU8 428 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 ZNF746Q6NUN9 644 aaPredicted RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 MACC1Q6ZN28 852 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 FBXO16Q8IX29 292 aaPredicted RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 RBBP8NLQ8NC74 664 aaPredicted RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 AGR3Q8TD06 166 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 STK32AQ8WU08 396 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 RGS18Q9NS28 235 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 DDIT4Q9NX09 232 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 TLR7Q9NYK1 1049 aaKnown RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 ZNF112Q9UJU3 913 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 GMEB2Q9UKD1 530 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 GAKO14976 1311 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 SPATA31A1Q5TZJ5 1347 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 CNTNAP2Q9UHC6 1331 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 MSH4O15457 936 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 CDC25BP30305 580 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 PTPN7P35236 360 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 PPM1AP35813 382 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 FEN1P39748 380 aaKnown RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 COPAP53621 1224 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 DHX34Q14147 1143 aaKnown RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 SNAP47Q5SQN1 464 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 BEND6Q5SZJ8 279 aaPredicted RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 ICA1LQ8NDH6 482 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 RELTQ969Z4 430 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 MCEEQ96PE7 176 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 SPATA9Q9BWV2 254 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 ARNT2Q9HBZ2 717 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 MCCC2Q9HCC0 563 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 LRRC4BQ9NT99 713 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 ADAM30Q9UKF2 790 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 DAGLAQ9Y4D2 1042 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 KPNA3O00505 521 aaPredicted RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 OR10H2O60403 315 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 CCNDBP1O95273 360 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 ADH1CP00326 375 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 VTNP04004 478 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 SLC2A4P14672 509 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 CDC25AP30304 524 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 FDFT1P37268 417 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 SLC26A2P50443 739 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 NUP107P57740 925 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 RGS1Q08116 209 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 MLC1Q15049 377 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 CYB5D1Q6P9G0 228 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 C16orf89Q6UX73 402 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 USP45Q70EL2 814 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 SETD3Q86TU7 594 aaPredicted RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 CENPLQ8N0S6 344 aaPredicted RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 SLC44A5Q8NCS7 719 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 BSNDQ8WZ55 320 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 ATG4CQ96DT6 458 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 ERLEC1Q96DZ1 483 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 CPB2Q96IY4 423 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 UROC1Q96N76 676 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 AGPAT1Q99943 283 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 RHBGQ9H310 441 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 METTL5Q9NRN9 209 aaKnown RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 ALKBH4Q9NXW9 302 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 XPO7Q9UIA9 1087 aaKnown RBP5.9□□□□□ -1.46
HERC4-206ENST00000427635 DNPEPQ9ULA0 475 aa5.9□□□□□ -1.46
HERC4-206ENST00000427635 SHROOM2Q13796 1616 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 STK36Q9NRP7 1315 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 CXCL11O14625 94 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 FOXP2O15409 715 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 LGR5O75473 907 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 EPHB2P29323 1055 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 AXLP30530 894 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 PSEN2P49810 448 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 OLR1P78380 273 aa5.9□□□□□ -1.47
HERC4-206ENST00000427635 ARID5BQ14865 1188 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms