RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 LCP1P13796 627 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 DGKEP52429 567 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 GCNT1Q02742 428 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 SPEM2Q0P670 501 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 PM20D1Q6GTS8 502 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 LCLAT1Q6UWP7 414 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 CACNA2D4Q7Z3S7 1137 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 ETFBKMTQ8IXQ9 262 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 FAM160A2Q8N612 972 aaPredicted RBP19.33■□□□□ 0.68
GPC1-205ENST00000427506 ALLCQ8N6M5 410 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 MLKLQ8NB16 471 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 TFAP2BQ92481 460 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 NDRG1Q92597 394 aaKnown RBP19.33■□□□□ 0.68
GPC1-205ENST00000427506 CNOT6LQ96LI5 555 aaKnown RBP19.33■□□□□ 0.68
GPC1-205ENST00000427506 CLSTN2Q9H4D0 955 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 DNAJC17Q9NVM6 304 aaKnown RBP19.33■□□□□ 0.68
GPC1-205ENST00000427506 MARCH2Q9P0N8 246 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 MMP17Q9ULZ9 603 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 ZNF510Q9Y2H8 683 aa19.33■□□□□ 0.68
GPC1-205ENST00000427506 ATG2BQ96BY7 2078 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 A0A0A0MRY4 1105 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 SLC12A8A0AV02 714 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 M0QYV0 167 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 KLF8O95600 359 aaPredicted RBP19.32■□□□□ 0.68
GPC1-205ENST00000427506 KRT5P13647 590 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 TYRP14679 529 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 BRD2P25440 801 aaKnown RBP19.32■□□□□ 0.68
GPC1-205ENST00000427506 STILQ15468 1287 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 CNGA2Q16280 664 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 C10orf76Q5T2E6 689 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 EMC10Q5UCC4 262 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 GRAMD4Q6IC98 578 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 TXNDC5Q8NBS9 432 aaKnown RBP19.32■□□□□ 0.68
GPC1-205ENST00000427506 RNF139Q8WU17 664 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 KCTD13Q8WZ19 329 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 DCLK3Q9C098 648 aa19.32■□□□□ 0.68
GPC1-205ENST00000427506 OLA1Q9NTK5 396 aaKnown RBP19.32■□□□□ 0.68
GPC1-205ENST00000427506 CALCAP01258 141 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 CORO1AP31146 461 aaKnown RBP19.31■□□□□ 0.68
GPC1-205ENST00000427506 RGS7P49802 495 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 CRY1Q16526 586 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 HSF5Q4G112 596 aaPredicted RBP19.31■□□□□ 0.68
GPC1-205ENST00000427506 EOGTQ5NDL2 527 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 ANO7Q6IWH7 933 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 Q6ZNB5 142 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 PHTF2Q8N3S3 785 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 TERB1Q8NA31 727 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 IL17RCQ8NAC3 791 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 BHMTQ93088 406 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 UBE2TQ9NPD8 197 aaPredicted RBP19.31■□□□□ 0.68
GPC1-205ENST00000427506 ZDHHC4Q9NPG8 344 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 EBF1Q9UH73 591 aa19.31■□□□□ 0.68
GPC1-205ENST00000427506 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.31■□□□□ 0.68
GPC1-205ENST00000427506 EP300Q09472 2414 aaPredicted RBP19.3■□□□□ 0.68
GPC1-205ENST00000427506 PIK3R2O00459 728 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 TRIM24O15164 1050 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 ALDH1A2O94788 518 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 CHKAP35790 457 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 KIR2DL1P43626 348 aaPredicted RBP19.3■□□□□ 0.68
GPC1-205ENST00000427506 MTIF2P46199 727 aaKnown RBP19.3■□□□□ 0.68
GPC1-205ENST00000427506 PKDCCQ504Y2 493 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 BSPRYQ5W0U4 402 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 KBTBD6Q86V97 674 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 DENND1CQ8IV53 801 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 ZNF513Q8N8E2 541 aaPredicted RBP19.3■□□□□ 0.68
GPC1-205ENST00000427506 EDEM1Q92611 657 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 RMDN1Q96DB5 314 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 KREMEN1Q96MU8 473 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 CRACR2AQ9BSW2 395 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 TPSD1Q9BZJ3 242 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 NUP62CLQ9H1M0 184 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 POLMQ9NP87 494 aaPredicted RBP19.3■□□□□ 0.68
GPC1-205ENST00000427506 PARD6AQ9NPB6 346 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 CNGB3Q9NQW8 809 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 ABCC13Q9NSE7 274 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 MARK1Q9P0L2 795 aa19.3■□□□□ 0.68
GPC1-205ENST00000427506 GVINP1Q7Z2Y8 2422 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 YJEFN3A6XGL0 299 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 E7ENQ6 273 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 SGK1O00141 431 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 CACNG3O60359 315 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 LRP3O75074 770 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 KLKB1P03952 638 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 DGKGP49619 791 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 MFAP3P55082 362 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 LMNB2Q03252 620 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 USP39Q53GS9 565 aaKnown RBP19.29■□□□□ 0.68
GPC1-205ENST00000427506 PMF1Q6P1K2 205 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 BHLHA9Q7RTU4 235 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 TRMT11Q7Z4G4 463 aaKnown RBP19.29■□□□□ 0.68
GPC1-205ENST00000427506 SLC35F5Q8WV83 523 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 MED15Q96RN5 788 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 ZSWIM1Q9BR11 485 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 SEMA4GQ9NTN9 838 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 PLK2Q9NYY3 685 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 AGO1Q9UL18 857 aaKnown RBP19.29■□□□□ 0.68
GPC1-205ENST00000427506 INVSQ9Y283 1065 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 OTOGLQ3ZCN5 2332 aa19.29■□□□□ 0.68
GPC1-205ENST00000427506 CFAP54Q96N23 3096 aa19.28■□□□□ 0.68
GPC1-205ENST00000427506 PRR5-ARHGAP8B1AHC4 643 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms