RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-215ENST00000427487 CHORDC1Q9UHD1 332 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-215ENST00000427487 MAGED2Q9UNF1 606 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-215ENST00000427487 TFR2Q9UP52 801 aa12.59□□□□□ -0.39
HDLBP-215ENST00000427487 HBS1LQ9Y450 684 aaKnown RBP12.59□□□□□ -0.39
HDLBP-215ENST00000427487 ANAPC1Q9H1A4 1944 aa12.58□□□□□ -0.39
HDLBP-215ENST00000427487 A0A0U1RQJ8 604 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 GRID2IPA4D2P6 1211 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 USP27XA6NNY8 438 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 IRAK2O43187 625 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 TLR5O60602 858 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 CSPG5O95196 566 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 ABL1P00519 1130 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 TCF3P15923 654 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 GABRR2P28476 465 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 RDXP35241 583 aaKnown RBP12.58□□□□□ -0.4
HDLBP-215ENST00000427487 ATP5C1P36542 298 aaKnown RBP12.58□□□□□ -0.4
HDLBP-215ENST00000427487 CDR1P51861 262 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 RNASE9P60153 205 aaKnown RBP12.58□□□□□ -0.4
HDLBP-215ENST00000427487 ETF1P62495 437 aaKnown RBP12.58□□□□□ -0.4
HDLBP-215ENST00000427487 COG7P83436 770 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 OGDHQ02218 1023 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 ZNF252P-AS1Q0IIN9 211 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 BRMS1LQ5PSV4 323 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 TRNP1Q6NT89 227 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 LLGL2Q6P1M3 1020 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 SYCE2Q6PIF2 218 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 DAAM2Q86T65 1068 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 VSIG1Q86XK7 387 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 EMC1Q8N766 993 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 DQX1Q8TE96 717 aaKnown RBP12.58□□□□□ -0.4
HDLBP-215ENST00000427487 ATRIPQ8WXE1 791 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 NTAN1Q96AB6 310 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 MSLNLQ96KJ4 702 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 NECTIN4Q96NY8 510 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 CORO1BQ9BR76 489 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 ZNF334Q9HCZ1 680 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-215ENST00000427487 OSER1Q9NX31 292 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 TRIM10Q9UDY6 481 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 DNMT3LQ9UJW3 386 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 NAALADL1Q9UQQ1 740 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 TLR6Q9Y2C9 796 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 JRKLQ9Y4A0 524 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 ALG6Q9Y672 507 aa12.58□□□□□ -0.4
HDLBP-215ENST00000427487 NOTCH4Q99466 2003 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 OBSL1O75147 1896 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 CDH23Q9H251 3354 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 CCDC66A2RUB6 948 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 ESPNB1AK53 854 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 PSTPIP1O43586 416 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 BUB1O43683 1085 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 PALMO75781 387 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 GRAP2O75791 330 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 MOCS3O95396 460 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 TRUB2O95900 331 aaKnown RBP12.57□□□□□ -0.4
HDLBP-215ENST00000427487 KRT7P08729 469 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 GTF2F1P35269 517 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDLBP-215ENST00000427487 MTHFRP42898 656 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 CXCR3P49682 368 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 ZNF135P52742 658 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-215ENST00000427487 SLC7A9P82251 487 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 IFRD2Q12894 506 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-215ENST00000427487 MESDQ14696 234 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 PPP2R5DQ14738 602 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 HADHQ16836 314 aaKnown RBP12.57□□□□□ -0.4
HDLBP-215ENST00000427487 ARHGAP15Q53QZ3 475 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 BOLA3Q53S33 107 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 SYPL2Q5VXT5 272 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 CES5AQ6NT32 575 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 SND1Q7KZF4 910 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDLBP-215ENST00000427487 RSRC2Q7L4I2 434 aaKnown RBP12.57□□□□□ -0.4
HDLBP-215ENST00000427487 NT5DC3Q86UY8 548 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 TEKT4Q8WW24 435 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 NDRG1Q92597 394 aaKnown RBP12.57□□□□□ -0.4
HDLBP-215ENST00000427487 CD101Q93033 1021 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 AZIN2Q96A70 460 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 RIPOR3Q96MK2 946 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 CFAP57Q96MR6 1250 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 TRIM7Q9C029 511 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 S1PR5Q9H228 398 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 IGFLR1Q9H665 355 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 TASP1Q9H6P5 420 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 PIDD1Q9HB75 910 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 WDR6Q9NNW5 1121 aaKnown RBP12.57□□□□□ -0.4
HDLBP-215ENST00000427487 CLEC1BQ9P126 229 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 AMFRQ9UKV5 643 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDLBP-215ENST00000427487 CAPN6Q9Y6Q1 641 aa12.57□□□□□ -0.4
HDLBP-215ENST00000427487 ZFP37Q9Y6Q3 630 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-215ENST00000427487 M0QYT0 321 aa12.56□□□□□ -0.4
HDLBP-215ENST00000427487 MDM4O15151 490 aa12.56□□□□□ -0.4
HDLBP-215ENST00000427487 LRCH4O75427 683 aa12.56□□□□□ -0.4
HDLBP-215ENST00000427487 SLC34A2O95436 690 aa12.56□□□□□ -0.4
HDLBP-215ENST00000427487 LATS1O95835 1130 aa12.56□□□□□ -0.4
HDLBP-215ENST00000427487 IGLV3-27P01718 113 aa12.56□□□□□ -0.4
HDLBP-215ENST00000427487 COMTP21964 271 aa12.56□□□□□ -0.4
HDLBP-215ENST00000427487 IGFBP4P22692 258 aa12.56□□□□□ -0.4
HDLBP-215ENST00000427487 CTNNA2P26232 953 aa12.56□□□□□ -0.4
HDLBP-215ENST00000427487 CCR1P32246 355 aa12.56□□□□□ -0.4
HDLBP-215ENST00000427487 PGFP49763 221 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms