RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 CEP295NLQ96MC4 621 aa16.1■□□□□ 0.17
PHF1-203ENST00000427004 KLF16Q9BXK1 252 aaPredicted RBP16.1■□□□□ 0.17
PHF1-203ENST00000427004 NACA2Q9H009 215 aa16.1■□□□□ 0.17
PHF1-203ENST00000427004 GDE1Q9NZC3 331 aa16.1■□□□□ 0.17
PHF1-203ENST00000427004 USTQ9Y2C2 406 aa16.1■□□□□ 0.17
PHF1-203ENST00000427004 WNT6Q9Y6F9 365 aa16.1■□□□□ 0.17
PHF1-203ENST00000427004 A0A0U1RQJ8 604 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 FGF19O95750 216 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 FTLP02792 175 aaPredicted RBP16.09■□□□□ 0.17
PHF1-203ENST00000427004 TPM1P09493 284 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 ARSAP15289 507 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 VCPP55072 806 aaKnown RBP16.09■□□□□ 0.17
PHF1-203ENST00000427004 RPL7AP62424 266 aaKnown RBP16.09■□□□□ 0.17
PHF1-203ENST00000427004 ZNF77Q15935 545 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 DCAF6Q58WW2 860 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 CCDC122Q5T0U0 273 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 SNX30Q5VWJ9 437 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 DAB2IPQ5VWQ8 1189 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 NAIF1Q69YI7 327 aaPredicted RBP16.09■□□□□ 0.17
PHF1-203ENST00000427004 ZDHHC14Q8IZN3 488 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 SLC44A3Q8N4M1 653 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 ATRIPQ8WXE1 791 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 OVCA2Q8WZ82 227 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 NOX5Q96PH1 765 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 MAGEB5Q9BZ81 275 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 NHEJ1Q9H9Q4 299 aaPredicted RBP16.09■□□□□ 0.17
PHF1-203ENST00000427004 CYLDQ9NQC7 956 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 TDP1Q9NUW8 608 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 NENFQ9UMX5 172 aa16.09■□□□□ 0.17
PHF1-203ENST00000427004 TCRBV5S1A1TA0A578 114 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 TRDMT1O14717 391 aaKnown RBP16.08■□□□□ 0.16
PHF1-203ENST00000427004 FBXO21O94952 628 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 KLKB1P03952 638 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 CCDC172P0C7W6 258 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 RALAP11233 206 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 GDI1P31150 447 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 ATP5C1P36542 298 aaKnown RBP16.08■□□□□ 0.16
PHF1-203ENST00000427004 GGCXP38435 758 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 SOX9P48436 509 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 GPC5P78333 572 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 OGDHQ02218 1023 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 USP4Q13107 963 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 GSE1Q14687 1217 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 C15orf59Q2T9L4 293 aaPredicted RBP16.08■□□□□ 0.16
PHF1-203ENST00000427004 RAD9BQ6WBX8 426 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 TRIM72Q6ZMU5 477 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 PHF13Q86YI8 300 aaPredicted RBP16.08■□□□□ 0.16
PHF1-203ENST00000427004 TMEM139Q8IV31 216 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 CNGA4Q8IV77 575 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 ZNF653Q96CK0 615 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 BTBD6Q96KE9 485 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 CFAP57Q96MR6 1250 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 ZFP14Q9HCL3 533 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 EHD2Q9NZN4 543 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 MARCH2Q9P0N8 246 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 PRKAG3Q9UGI9 489 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 XPO7Q9UIA9 1087 aaKnown RBP16.08■□□□□ 0.16
PHF1-203ENST00000427004 SNX10Q9Y5X0 201 aa16.08■□□□□ 0.16
PHF1-203ENST00000427004 GOLGA6L7A0A1B0GV03 622 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 OTOL1A6NHN0 477 aaPredicted RBP16.07■□□□□ 0.16
PHF1-203ENST00000427004 DPYSL4O14531 572 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 GREM1O60565 184 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 DAB1O75553 588 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 YWHAZP63104 245 aaKnown RBP16.07■□□□□ 0.16
PHF1-203ENST00000427004 SLC7A9P82251 487 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 CDO1Q16878 200 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 BBS7Q8IWZ6 715 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 SCML4Q8N228 414 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 RNF139Q8WU17 664 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 IRGQQ8WZA9 623 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 IQCDQ96DY2 449 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 MYEOVQ96EZ4 313 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 MCEEQ96PE7 176 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 SLC2A13Q96QE2 648 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 TBCBQ99426 244 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 THAP2Q9H0W7 228 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 NUCKS1Q9H1E3 243 aaKnown RBP16.07■□□□□ 0.16
PHF1-203ENST00000427004 ANLNQ9NQW6 1124 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 ABCC13Q9NSE7 274 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 CLIC5Q9NZA1 410 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 CNOT8Q9UFF9 292 aaKnown RBP16.07■□□□□ 0.16
PHF1-203ENST00000427004 TMEM59LQ9UK28 342 aa16.07■□□□□ 0.16
PHF1-203ENST00000427004 ANTXRLA6NF34 631 aa16.06■□□□□ 0.16
PHF1-203ENST00000427004 CAPN9O14815 690 aa16.06■□□□□ 0.16
PHF1-203ENST00000427004 AKR1B10O60218 316 aa16.06■□□□□ 0.16
PHF1-203ENST00000427004 RTN2O75298 545 aa16.06■□□□□ 0.16
PHF1-203ENST00000427004 STC2O76061 302 aa16.06■□□□□ 0.16
PHF1-203ENST00000427004 MOCS2O96007 188 aaPredicted RBP16.06■□□□□ 0.16
PHF1-203ENST00000427004 COL9A1P20849 921 aa16.06■□□□□ 0.16
PHF1-203ENST00000427004 DDX6P26196 483 aaKnown RBP eCLIP16.06■□□□□ 0.16
PHF1-203ENST00000427004 RFC1P35251 1148 aaPredicted RBP16.06■□□□□ 0.16
PHF1-203ENST00000427004 SULT1E1P49888 294 aa16.06■□□□□ 0.16
PHF1-203ENST00000427004 GALCP54803 685 aa16.06■□□□□ 0.16
PHF1-203ENST00000427004 ATP11AP98196 1134 aa16.06■□□□□ 0.16
PHF1-203ENST00000427004 NME3Q13232 169 aa16.06■□□□□ 0.16
PHF1-203ENST00000427004 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
PHF1-203ENST00000427004 ALKBH5Q6P6C2 394 aaKnown RBP16.06■□□□□ 0.16
PHF1-203ENST00000427004 SLC26A9Q7LBE3 791 aa16.06■□□□□ 0.16
PHF1-203ENST00000427004 CELF5Q8N6W0 485 aaKnown RBP16.06■□□□□ 0.16
PHF1-203ENST00000427004 ACRBPQ8NEB7 543 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms