RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ITIH2P19823 946 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 GRIK1P39086 918 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 SLC5A3P53794 718 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 SMARCB1Q12824 385 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 ANKRD20A8PQ5CZ79 823 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 RFX6Q8HWS3 928 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 RNF168Q8IYW5 571 aaPredicted RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 TRIM43Q96BQ3 446 aaPredicted RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 LRRC45Q96CN5 670 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 ZNF689Q96CS4 500 aaPredicted RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 C8orf48Q96LL4 319 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 MAK16Q9BXY0 300 aaKnown RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 TXLNGYQ9BZA5 131 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 CWH43Q9H720 699 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 RC3H2Q9HBD1 1191 aaKnown RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 PIGVQ9NUD9 493 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 GPATCH2LQ9NWQ4 482 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 RCOR3Q9P2K3 495 aaPredicted RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 FZD10Q9ULW2 581 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 NCAM1P13591 858 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 PBX3P40426 434 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 ALDH7A1P49419 539 aaKnown RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 PLTPP55058 493 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 DYNLT1P63172 113 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 RTP2Q5QGT7 225 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 COL13A1Q5TAT6 717 aaPredicted RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 BSPRYQ5W0U4 402 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 ANKS3Q6ZW76 656 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 ZNF365Q70YC5 407 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 TMC3Q7Z5M5 1100 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 FAM131BQ86XD5 332 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 CEP57Q86XR8 500 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 IQCKQ8N0W5 287 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 PQLC3Q8N755 202 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 PCDH19Q8TAB3 1148 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 SCAMP5Q8TAC9 235 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 BCL7CQ8WUZ0 217 aaPredicted RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 NTAN1Q96AB6 310 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 HAUS1Q96CS2 278 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 SNF8Q96H20 258 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 WDR6Q9NNW5 1121 aaKnown RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 ABI2Q9NYB9 513 aaPredicted RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 SAE1Q9UBE0 346 aaPredicted RBP15.82■□□□□ 0.12
ACTB-204ENST00000425660 ASIC3Q9UHC3 531 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 ZNF148Q9UQR1 794 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 PCDHB5Q9Y5E4 795 aa15.82■□□□□ 0.12
ACTB-204ENST00000425660 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 NT5C1B-RDH14C9J2C7 533 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 TRIM66O15016 1216 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 EFCAB14O75071 495 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 UPP2O95045 317 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 F9P00740 461 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 PECAM1P16284 738 aaPredicted RBP15.81■□□□□ 0.12
ACTB-204ENST00000425660 TGM2P21980 687 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 DEUP1Q05D60 604 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 SCAPQ12770 1279 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 GPR17Q13304 367 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 NOMO1Q15155 1222 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 SPDYCQ5MJ68 293 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 ALS2CLQ60I27 953 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 PLD5Q8N7P1 536 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 TTPALQ9BTX7 342 aa15.81■□□□□ 0.12
ACTB-204ENST00000425660 H7C4K7 107 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 AGPSO00116 658 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 PPFIA2O75334 1257 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 IGLV3-25P01717 112 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 KRT14P02533 472 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 CSF2RAP15509 400 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 CALCOCO2Q13137 446 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 GPS2Q13227 327 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 EIF4EBP2Q13542 120 aaPredicted RBP15.8■□□□□ 0.12
ACTB-204ENST00000425660 PPP6R3Q5H9R7 873 aaPredicted RBP15.8■□□□□ 0.12
ACTB-204ENST00000425660 MFSD5Q6N075 450 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 RHBDF2Q6PJF5 856 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 GSTA5Q7RTV2 222 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 SLC7A14Q8TBB6 771 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 P3H4Q92791 437 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 B3GALT6Q96L58 329 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 TMEM121Q9BTD3 319 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 DHX35Q9H5Z1 703 aaKnown RBP15.8■□□□□ 0.12
ACTB-204ENST00000425660 PRDM16Q9HAZ2 1276 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 MED4Q9NPJ6 270 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 GOLGA6BA6NDN3 693 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 ATF2P15336 505 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 CAV1Q03135 178 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 RSPO2Q6UXX9 243 aaPredicted RBP15.8■□□□□ 0.12
ACTB-204ENST00000425660 BBOF1Q8ND07 529 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 SPPL2BQ8TCT7 592 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.8■□□□□ 0.12
ACTB-204ENST00000425660 C2orf15Q8WU43 125 aaKnown RBP15.8■□□□□ 0.12
ACTB-204ENST00000425660 PIK3R5Q8WYR1 880 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 IGSF21Q96ID5 467 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 CSPG4P5Q96PW8 444 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 KCTD15Q96SI1 283 aaPredicted RBP15.8■□□□□ 0.12
ACTB-204ENST00000425660 PCDH9Q9HC56 1237 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 IL37Q9NZH6 218 aa15.8■□□□□ 0.12
ACTB-204ENST00000425660 MTRF1LQ9UGC7 380 aaKnown RBP15.8■□□□□ 0.12
ACTB-204ENST00000425660 FAM92AA1XBS5 289 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 APOL1O14791 398 aa15.79■□□□□ 0.12
ACTB-204ENST00000425660 MCF2LO15068 1137 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms