RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ETNK2Q9NVF9 386 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 ZNF212Q9UDV6 495 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 SIX4Q9UIU6 781 aa7.81□□□□□ -1.16
SMARCC1-202ENST00000425518 APOL1O14791 398 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 APOEP02649 317 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 C6orf222P0C671 652 aaPredicted RBP7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 GPD2P43304 727 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 IGBP1P78318 339 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 SLC25A3Q00325 362 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 CA9Q16790 459 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 FAM47CQ5HY64 1035 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 ANGEL2Q5VTE6 544 aaKnown RBP7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 TRNP1Q6NT89 227 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 SHKBP1Q8TBC3 707 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 MCRS1Q96EZ8 462 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 GBP5Q96PP8 586 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 PANX3Q96QZ0 392 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 MMADHCQ9H3L0 296 aaPredicted RBP7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 POPDC2Q9HBU9 364 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 NDE1Q9NXR1 346 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 SLC17A6Q9P2U8 582 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 SLC7A8Q9UHI5 535 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 A8MXQ7 604 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 LACTBL1A8MY62 500 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 NOP56O00567 594 aaKnown RBP7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 KCNA4P22459 653 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 BAG6P46379 1132 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 CLCN3P51790 818 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 RPL10AP62906 217 aaKnown RBP7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 CRADDP78560 199 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 CMPK2Q5EBM0 449 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 FAM183BPQ6ZVS7 135 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 RSPH3Q86UC2 560 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 NETO2Q8NC67 525 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 C7orf26Q96N11 449 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 MAGEB5Q9BZ81 275 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 MIS12Q9H081 205 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 HOXC10Q9NYD6 342 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 LOC100653049A0A140TA62 436 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 MAGEA13PA6NCF6 341 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 SLC15A5A6NIM6 579 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 CAPN14A8MX76 684 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 KRT34O76011 436 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 METTL18O95568 372 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 OAZ1P54368 228 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 AP2B1P63010 937 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 GRM1Q13255 1194 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 AP1ARQ63HQ0 302 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 MAP1SQ66K74 1059 aaPredicted RBP7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 JADE1Q6IE81 842 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 OR52E8Q6IFG1 317 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 CATSPERGQ6ZRH7 1159 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 NCAPG2Q86XI2 1143 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 SCUBE3Q8IX30 993 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 EFCAB3Q8N7B9 438 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 STKLD1Q8NE28 680 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 GSTCDQ8NEC7 633 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 PCDH19Q8TAB3 1148 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 USP6NLQ92738 828 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 CCDC124Q96CT7 223 aaKnown RBP7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 CYP4F11Q9HBI6 524 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 DNAJC16Q9Y2G8 782 aa7.8□□□□□ -1.16
SMARCC1-202ENST00000425518 C2CD4BA6NLJ0 364 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 SPDYE16A6NNV3 312 aaPredicted RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 ABLIM1O14639 778 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 KLF11O14901 512 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 AHCYL1O43865 530 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 MAGEC1O60732 1142 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 AP1G2O75843 785 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 TM7SF2O76062 418 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 FESP07332 822 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 BPGMP07738 259 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 IL4RP24394 825 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 RAP1GDS1P52306 607 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 NDST1P52848 882 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 MXD4Q14582 209 aaPredicted RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 FASTKD1Q53R41 847 aaKnown RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 RASIP1Q5U651 963 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 DCAF15Q66K64 600 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 MICALL2Q8IY33 904 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 PQLC3Q8N755 202 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 FAM172AQ8WUF8 416 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 PYDC1Q8WXC3 89 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 FGD4Q96M96 766 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 CDT1Q9H211 546 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 MINDY3Q9H8M7 445 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 PLAC1Q9HBJ0 212 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 PPM1HQ9ULR3 514 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 HBS1LQ9Y450 684 aaKnown RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 GPR25O00155 361 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 ACKR2O00590 384 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 TRDMT1O14717 391 aaKnown RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 ITM2AO43736 263 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 B4GALT4O60513 344 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 CILPO75339 1184 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 C1QAP02745 245 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 STAG3L1P0CL83 205 aa7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 SESN2P58004 480 aaPredicted RBP7.79□□□□□ -1.16
SMARCC1-202ENST00000425518 HSDL1Q3SXM5 330 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms