RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 RAB44Q7Z6P3 723 aaPredicted RBP13.43□□□□□ -0.26
SGCE-203ENST00000425444 TTC39CQ8N584 583 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 RPLP0P6Q8NHW5 317 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 SCAMP5Q8TAC9 235 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 NELFBQ8WX92 580 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 EXOC4Q96A65 974 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 CYFIP2Q96F07 1278 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 CEP63Q96MT8 703 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 SMOQ99835 787 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 NACA2Q9H009 215 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 METTL14Q9HCE5 456 aaKnown RBP13.43□□□□□ -0.26
SGCE-203ENST00000425444 CACNA2D2Q9NY47 1150 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 RAXQ9Y2V3 346 aa13.43□□□□□ -0.26
SGCE-203ENST00000425444 TNFRSF10BO14763 440 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 BEST1O76090 585 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 NFATC1O95644 943 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 OAS1P00973 400 aaKnown RBP13.42□□□□□ -0.26
SGCE-203ENST00000425444 PRB1P04280 392 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 FAM193AP78312 1265 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 MORC3Q14149 939 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 DMC1Q14565 340 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 HECTD3Q5T447 861 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 SYT13Q7L8C5 426 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 ZMIZ2Q8NF64 920 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 FAXDC2Q96IV6 333 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 HEXIM2Q96MH2 286 aaKnown RBP13.42□□□□□ -0.26
SGCE-203ENST00000425444 HNRNPABQ99729 332 aaKnown RBP13.42□□□□□ -0.26
SGCE-203ENST00000425444 FBXO44Q9H4M3 255 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 ECT2Q9H8V3 914 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 CISHQ9NSE2 258 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 COMMD8Q9NX08 183 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 GMIPQ9P107 970 aa13.42□□□□□ -0.26
SGCE-203ENST00000425444 CHORDC1Q9UHD1 332 aaPredicted RBP13.42□□□□□ -0.26
SGCE-203ENST00000425444 EVLQ9UI08 416 aaPredicted RBP13.42□□□□□ -0.26
SGCE-203ENST00000425444 SHROOM3Q8TF72 1996 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 OTOL1A6NHN0 477 aaPredicted RBP13.41□□□□□ -0.26
SGCE-203ENST00000425444 UPK3BL1B0FP48 263 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 UPK3BL2E5RIL1 263 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 TCF3P15923 654 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 ENGP17813 658 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 DRD1P21728 446 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 BCKDHBP21953 392 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 GJA4P35212 333 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 STX17P56962 302 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 SLC7A9P82251 487 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 LRMPQ12912 555 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 NR1H3Q13133 447 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 PAK1Q13153 545 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 SEMA3BQ13214 749 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 EML3Q32P44 896 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 CLEC20AQ6ZU45 233 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 FILIP1Q7Z7B0 1213 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 DDX42Q86XP3 938 aaKnown RBP eCLIP13.41□□□□□ -0.26
SGCE-203ENST00000425444 HDDC3Q8N4P3 179 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 TSTD1Q8NFU3 115 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 MDM1Q8TC05 714 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 WHAMMQ8TF30 809 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 SLC35C1Q96A29 364 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 ARID3AQ99856 593 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 TPSD1Q9BZJ3 242 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 RNF38Q9H0F5 515 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 FBRSL1Q9HCM7 1045 aaKnown RBP13.41□□□□□ -0.26
SGCE-203ENST00000425444 CSNK1G1Q9HCP0 422 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 CFAP97Q9P2B7 532 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 ANAPC1Q9H1A4 1944 aa13.41□□□□□ -0.26
SGCE-203ENST00000425444 USP9XQ93008 2570 aaPredicted RBP13.4□□□□□ -0.26
SGCE-203ENST00000425444 PPP1R3GB7ZBB8 358 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 SCAMP3O14828 347 aaKnown RBP13.4□□□□□ -0.26
SGCE-203ENST00000425444 OLFM2O95897 454 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 ACO1P21399 889 aaKnown RBP13.4□□□□□ -0.26
SGCE-203ENST00000425444 BMP6P22004 513 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 FMO5P49326 533 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 ATXN3P54252 364 aaPredicted RBP13.4□□□□□ -0.26
SGCE-203ENST00000425444 MCCD1P59942 119 aaPredicted RBP13.4□□□□□ -0.26
SGCE-203ENST00000425444 YWHAEP62258 255 aaKnown RBP13.4□□□□□ -0.26
SGCE-203ENST00000425444 ZXDBP98169 803 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 CETN1Q12798 172 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 CUL2Q13617 745 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 CAMK4Q16566 473 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 FBXO43Q4G163 708 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 PPP1R26Q5T8A7 1209 aaPredicted RBP13.4□□□□□ -0.26
SGCE-203ENST00000425444 TTI2Q6NXR4 508 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 GPRIN1Q7Z2K8 1008 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 TRIML1Q8N9V2 468 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 TATDN2Q93075 761 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 ACDQ96AP0 544 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 CHFRQ96EP1 664 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 TMEM176AQ96HP8 235 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 DUSP9Q99956 384 aaKnown RBP13.4□□□□□ -0.26
SGCE-203ENST00000425444 P2RY13Q9BPV8 354 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 CCSER2Q9H7U1 834 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 SCUBE2Q9NQ36 999 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 TLR8Q9NR97 1041 aaKnown RBP13.4□□□□□ -0.26
SGCE-203ENST00000425444 COQ4Q9Y3A0 265 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 SH3BP1Q9Y3L3 701 aa13.4□□□□□ -0.26
SGCE-203ENST00000425444 HELZP42694 1942 aaKnown RBP13.4□□□□□ -0.26
SGCE-203ENST00000425444 ATMQ13315 3056 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 MGAQ8IWI9 3026 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 FAM92AA1XBS5 289 aa13.39□□□□□ -0.27
SGCE-203ENST00000425444 SLC9A3R1O14745 358 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms