RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 HTR3DQ70Z44 454 aa23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SLC47A2Q86VL8 602 aa23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 PASD1Q8IV76 773 aa23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 DHX40Q8IX18 779 aaKnown RBP23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 FAM71AQ8IYT1 594 aa23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 RNF139Q8WU17 664 aa23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 IRGQQ8WZA9 623 aa23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 IER2Q9BTL4 223 aa23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 FUCA2Q9BTY2 467 aa23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 NAA15Q9BXJ9 866 aaKnown RBP23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 GANQ9H2C0 597 aa23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 PLCB1Q9NQ66 1216 aa23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 FAM207AQ9NSI2 230 aaPredicted RBP23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 OLA1Q9NTK5 396 aaKnown RBP23.39■■□□□ 1.33
PTCHD3P2-201ENST00000424937 GREM1O60565 184 aa23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 EGFP01133 1207 aa23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 ATP1A3P13637 1013 aa23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 CLCN1P35523 988 aa23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 ACADSBP45954 432 aa23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 GALK1P51570 392 aa23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 COG7P83436 770 aa23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 GAB4Q2WGN9 574 aa23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 RHBDF2Q6PJF5 856 aa23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 PCMTD1Q96MG8 357 aaPredicted RBP23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 FBRSL1Q9HCM7 1045 aaKnown RBP23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 ABCC13Q9NSE7 274 aa23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 CYTH4Q9UIA0 394 aa23.38■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SLC12A8A0AV02 714 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SMTNL1A8MU46 457 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 F8VZ95 297 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 DRD1P21728 446 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 OPRD1P41143 372 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 ZNF165P49910 485 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 PDCLQ13371 301 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SYCP1Q15431 976 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 MAML2Q8IZL2 1156 aaPredicted RBP23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 STK32AQ8WU08 396 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 GOLGA1Q92805 767 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 PCDHGC3Q9UN70 934 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SIK3Q9Y2K2 1263 aa23.37■■□□□ 1.33
PTCHD3P2-201ENST00000424937 E5RJQ4 531 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 LTFP02788 710 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 CORO1AP31146 461 aaKnown RBP23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 KRT9P35527 623 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 RPL34P49207 117 aaKnown RBP23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 BPIFB4P59827 614 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 POLR2FP61218 127 aaKnown RBP23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 UBXN1Q04323 297 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 GAS6Q14393 721 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 Q6ZNB5 142 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 FMNL3Q8IVF7 1028 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SYNPOQ8N3V7 929 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 PHOX2BQ99453 314 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SLC4A5Q9BY07 1137 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 STK33Q9BYT3 514 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 PRMT8Q9NR22 394 aaPredicted RBP23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SPHK2Q9NRA0 654 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SFMBT1Q9UHJ3 866 aa23.36■■□□□ 1.33
PTCHD3P2-201ENST00000424937 EPHB6O15197 1021 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SART1O43290 800 aaKnown RBP23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SP9P0CG40 484 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 CSTF1Q05048 431 aaKnown RBP23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 GAD2Q05329 585 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 ANO4Q32M45 955 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 APTXQ7Z2E3 356 aaKnown RBP23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 C12orf40Q86WS4 652 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SCUBE3Q8IX30 993 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SPEM1Q8N4L4 309 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 C1orf131Q8NDD1 294 aaKnown RBP23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 FAM149B1Q96BN6 582 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 PLD4Q96BZ4 506 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 NLRC4Q9NPP4 1024 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 FBXO4Q9UKT5 387 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 CEP83Q9Y592 693 aa23.35■■□□□ 1.33
PTCHD3P2-201ENST00000424937 RNF40O75150 1001 aa23.34■■□□□ 1.33
PTCHD3P2-201ENST00000424937 CCR3P51677 355 aa23.34■■□□□ 1.33
PTCHD3P2-201ENST00000424937 MSANTD2Q6P1R3 559 aa23.34■■□□□ 1.33
PTCHD3P2-201ENST00000424937 TPGS1Q6ZTW0 290 aa23.34■■□□□ 1.33
PTCHD3P2-201ENST00000424937 TMEM25Q86YD3 366 aa23.34■■□□□ 1.33
PTCHD3P2-201ENST00000424937 NEK11Q8NG66 645 aa23.34■■□□□ 1.33
PTCHD3P2-201ENST00000424937 DCLK3Q9C098 648 aa23.34■■□□□ 1.33
PTCHD3P2-201ENST00000424937 PDCL3Q9H2J4 239 aa23.34■■□□□ 1.33
PTCHD3P2-201ENST00000424937 TJP2Q9UDY2 1190 aa23.34■■□□□ 1.33
PTCHD3P2-201ENST00000424937 LRRC10BA6NIK2 292 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 NEDD8-MDP1E9PL57 170 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 HOXC11O43248 304 aaPredicted RBP23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 PAPSS1O43252 624 aaPredicted RBP23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 MSI1O43347 362 aaKnown RBP23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 KLKB1P03952 638 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 CYP11B1P15538 503 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SLC6A11P48066 632 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 SATB1Q01826 763 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 KDSRQ06136 332 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 TAF3Q5VWG9 929 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 PKN3Q6P5Z2 889 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 TSSK4Q6SA08 328 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 TMEM110Q86TL2 294 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 WDTC1Q8N5D0 677 aa23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 EZH1Q92800 747 aaPredicted RBP23.33■■□□□ 1.33
PTCHD3P2-201ENST00000424937 NOX5Q96PH1 765 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms