RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SLC22A25Q6T423 547 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 CYP20A1Q6UW02 462 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 RNF207Q6ZRF8 634 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 PLEKHM3Q6ZWE6 761 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 LARP4Q71RC2 724 aaKnown RBP eCLIP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 CCDC186Q7Z3E2 898 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 METTL23Q86XA0 190 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 DIS3L2Q8IYB7 885 aaKnown RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 TMEM57Q8N5G2 664 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 DPP10Q8N608 796 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 AOPEPQ8N6M6 819 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 USP38Q8NB14 1042 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 OR6Y1Q8NGX8 325 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 NRG4Q8WWG1 115 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 EDAQ92838 391 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 PTP4A1Q93096 173 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 NMD3Q96D46 503 aaKnown RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 SNX22Q96L94 193 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 RAB3IPQ96QF0 476 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 ATP6V0BQ99437 205 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 PRPF18Q99633 342 aaKnown RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 SPXQ9BT56 116 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 PLA2G12BQ9BX93 195 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 ANO3Q9BYT9 981 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 OR10A5Q9H207 317 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 C12orf65Q9H3J6 166 aaKnown RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 RPAP3Q9H6T3 665 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 RMI1Q9H9A7 625 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 MSL2Q9HCI7 577 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 LMBRD1Q9NUN5 540 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 SEPT11Q9NVA2 429 aaKnown RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 RBM28Q9NW13 759 aaKnown RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 MCM9Q9NXL9 1143 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 UTP6Q9NYH9 597 aaKnown RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 TAB2Q9NYJ8 693 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 AIPL1Q9NZN9 384 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 C6orf203Q9P0P8 240 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 TBC1D14Q9P2M4 693 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 SUCLA2Q9P2R7 463 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-205ENST00000424674 Q9UFV3 132 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 SUN2Q9UH99 717 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 ANAPC5Q9UJX4 755 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 LYVE1Q9Y5Y7 322 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 PIK3R4Q99570 1358 aa3.98□□□□□ -1.77
SF3B1-205ENST00000424674 ST20-MTHFSA0A0A6YYL1 179 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 A0A0B4J203 849 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 A0A0U1RQK1 487 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 ZNF320A2RRD8 509 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CCDC151A5D8V7 595 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CCDC169A6NNP5 214 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 PTGES3LE9PB15 166 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 H3BNC9 293 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 BOLA2-SMG1P6H3BVE0 249 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 MATN2O00339 956 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 PIP5K1BO14986 540 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 WDR46O15213 610 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 ASNA1O43681 348 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 STX6O43752 255 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 NEMFO60524 1076 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 EXOC3O60645 756 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 TBX10O75333 385 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 ACTL6BO94805 426 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CCNDBP1O95273 360 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 METTL18O95568 372 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 PNPP00491 289 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CNPP09543 421 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 JUPP14923 745 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 RXRAP19793 462 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 ACO1P21399 889 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CCNCP24863 283 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 PTX3P26022 381 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 MAPK4P31152 587 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 HOXA11P31270 313 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 PSMC2P35998 433 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 RPS19P39019 145 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 GP5P40197 560 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 FNTBP49356 437 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 MXI1P50539 228 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CCT4P50991 539 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 HMGA2P52926 109 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 AP2B1P63010 937 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CD83Q01151 205 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 DSC2Q02487 901 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 MALLQ13021 153 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 DUSP8Q13202 625 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CUL4BQ13620 913 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 SPIDRQ14159 915 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 NAA25Q14CX7 972 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 PCOLCEQ15113 449 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 TBCEQ15813 527 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 ALG11Q2TAA5 492 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 PITRM1Q5JRX3 1037 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 TOR1AIP1Q5JTV8 583 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 PRAMEF14Q5SWL7 426 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CATSPEREQ5SY80 951 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 GRAMD4Q6IC98 578 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 SHQ1Q6PI26 577 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 FIP1L1Q6UN15 594 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 FAM83HQ6ZRV2 1179 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 USP30Q70CQ3 517 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms