RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 CCR3P51677 355 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 NCAPHQ15003 741 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 SKOR2Q2VWA4 1001 aaPredicted RBP19.57■□□□□ 0.72
PRNP-202ENST00000424424 FBXO43Q4G163 708 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 FSTL4Q6MZW2 842 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 DPY19L2P1Q6NXN4 242 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 RHBDF2Q6PJF5 856 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 MAMSTRQ6ZN01 415 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 BHLHA9Q7RTU4 235 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 FAM71AQ8IYT1 594 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 CCDC26Q8TAB7 109 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 CHFRQ96EP1 664 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 PCMTD1Q96MG8 357 aaPredicted RBP19.57■□□□□ 0.72
PRNP-202ENST00000424424 STK33Q9BYT3 514 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 MIS12Q9H081 205 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 PCDHGC3Q9UN70 934 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 DAAM1Q9Y4D1 1078 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 CEP83Q9Y592 693 aa19.57■□□□□ 0.72
PRNP-202ENST00000424424 SLC12A8A0AV02 714 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 LRRC10BA6NIK2 292 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 STC2O76061 302 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 LTFP02788 710 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 ZNF18P17022 549 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 CLCN1P35523 988 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 RPL34P49207 117 aaKnown RBP19.56■□□□□ 0.72
PRNP-202ENST00000424424 LY6G5CQ5SRR4 150 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 SPEM1Q8N4L4 309 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 EDEM1Q92611 657 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 WBP2Q969T9 261 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 NOX5Q96PH1 765 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 PDCL3Q9H2J4 239 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 SPHK2Q9NRA0 654 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 FAM86C1Q9NVL1 165 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 CACNA1IQ9P0X4 2223 aa19.56■□□□□ 0.72
PRNP-202ENST00000424424 SYCE3A1L190 88 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 LGALS16A8MUM7 142 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 ATG13O75143 517 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 GABBR2O75899 941 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 HMBSP08397 361 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 SP9P0CG40 484 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 EIF2DP41214 584 aaKnown RBP19.55■□□□□ 0.72
PRNP-202ENST00000424424 CXCL12P48061 93 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 MRE11P49959 708 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 SNX16P57768 344 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 UBXN1Q04323 297 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 CSTF1Q05048 431 aaKnown RBP19.55■□□□□ 0.72
PRNP-202ENST00000424424 ANO4Q32M45 955 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 ZNF528Q3MIS6 628 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 PREPLQ4J6C6 727 aaPredicted RBP19.55■□□□□ 0.72
PRNP-202ENST00000424424 ZC3H14Q6PJT7 736 aaKnown RBP19.55■□□□□ 0.72
PRNP-202ENST00000424424 SLC47A2Q86VL8 602 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 SCUBE3Q8IX30 993 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 PLD4Q96BZ4 506 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 TRIM62Q9BVG3 475 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 NAA15Q9BXJ9 866 aaKnown RBP19.55■□□□□ 0.72
PRNP-202ENST00000424424 SLC4A5Q9BY07 1137 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 LHX5Q9H2C1 402 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 ATG2BQ96BY7 2078 aa19.55■□□□□ 0.72
PRNP-202ENST00000424424 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.54■□□□□ 0.72
PRNP-202ENST00000424424 GREM1O60565 184 aa19.54■□□□□ 0.72
PRNP-202ENST00000424424 EGFP01133 1207 aa19.54■□□□□ 0.72
PRNP-202ENST00000424424 PNMA6AP0CW24 399 aaPredicted RBP19.54■□□□□ 0.72
PRNP-202ENST00000424424 CHKAP35790 457 aa19.54■□□□□ 0.72
PRNP-202ENST00000424424 OPRD1P41143 372 aa19.54■□□□□ 0.72
PRNP-202ENST00000424424 TMEM110Q86TL2 294 aa19.54■□□□□ 0.72
PRNP-202ENST00000424424 FMNL3Q8IVF7 1028 aa19.54■□□□□ 0.72
PRNP-202ENST00000424424 NEK11Q8NG66 645 aa19.54■□□□□ 0.72
PRNP-202ENST00000424424 CLEC4CQ8WTT0 213 aa19.54■□□□□ 0.72
PRNP-202ENST00000424424 FAM149B1Q96BN6 582 aa19.54■□□□□ 0.72
PRNP-202ENST00000424424 PNKPQ96T60 521 aa19.54■□□□□ 0.72
PRNP-202ENST00000424424 FBRSL1Q9HCM7 1045 aaKnown RBP19.54■□□□□ 0.72
PRNP-202ENST00000424424 FAM207AQ9NSI2 230 aaPredicted RBP19.54■□□□□ 0.72
PRNP-202ENST00000424424 WDR35Q9P2L0 1181 aa19.54■□□□□ 0.72
PRNP-202ENST00000424424 HBS1LQ9Y450 684 aaKnown RBP19.54■□□□□ 0.72
PRNP-202ENST00000424424 E5RJQ4 531 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 HOXC11O43248 304 aaPredicted RBP19.53■□□□□ 0.72
PRNP-202ENST00000424424 NCAM1P13591 858 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 CORO1AP31146 461 aaKnown RBP19.53■□□□□ 0.72
PRNP-202ENST00000424424 HARS2P49590 506 aaKnown RBP19.53■□□□□ 0.72
PRNP-202ENST00000424424 POLR2FP61218 127 aaKnown RBP19.53■□□□□ 0.72
PRNP-202ENST00000424424 PDCLQ13371 301 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 GAS6Q14393 721 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 SYCP1Q15431 976 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 GAB4Q2WGN9 574 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 FILIP1LQ4L180 1135 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 Q6ZNB5 142 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 Q6ZS52 159 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 NUDT18Q6ZVK8 323 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 TMEM25Q86YD3 366 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 PASD1Q8IV76 773 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 DHX40Q8IX18 779 aaKnown RBP19.53■□□□□ 0.72
PRNP-202ENST00000424424 MAML2Q8IZL2 1156 aaPredicted RBP19.53■□□□□ 0.72
PRNP-202ENST00000424424 PPP1R13BQ96KQ4 1090 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 XPO6Q96QU8 1125 aaKnown RBP19.53■□□□□ 0.72
PRNP-202ENST00000424424 SPAG5Q96R06 1193 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 FUCA2Q9BTY2 467 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 GANQ9H2C0 597 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 HSD3B7Q9H2F3 369 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 PRMT8Q9NR22 394 aaPredicted RBP19.53■□□□□ 0.72
PRNP-202ENST00000424424 SFMBT1Q9UHJ3 866 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms