RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.22■□□□□ 0.35
CMTM3-202ENST00000424011 SAE1Q9UBE0 346 aaPredicted RBP17.22■□□□□ 0.35
CMTM3-202ENST00000424011 CDH9Q9ULB4 789 aa17.22■□□□□ 0.35
CMTM3-202ENST00000424011 FAM200BP0CF97 657 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 ODC1P11926 461 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 PCSK1P29120 753 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 MORF4L2Q15014 288 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 CCDC38Q502W7 563 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 RNF169Q8NCN4 708 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 SH3TC2Q8TF17 1288 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 P3H4Q92791 437 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 C11orf84Q9BUA3 381 aaPredicted RBP17.21■□□□□ 0.35
CMTM3-202ENST00000424011 LRRC4Q9HBW1 653 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 ARHGEF37A1IGU5 675 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 MGRN1O60291 552 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 MGEA5O60502 916 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 ATP2C2O75185 946 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 ACAT1P24752 427 aaKnown RBP17.21■□□□□ 0.35
CMTM3-202ENST00000424011 HDAC4P56524 1084 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 EIF3EP60228 445 aaKnown RBP17.21■□□□□ 0.35
CMTM3-202ENST00000424011 XRCC4Q13426 336 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 ANKRD20A8PQ5CZ79 823 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 MDH1BQ5I0G3 518 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 ERMARDQ5T6L9 678 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 STRADAQ7RTN6 431 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 TAX1BP1Q86VP1 789 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 RNF157Q96PX1 679 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 SYT15Q9BQS2 421 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 ZNF670Q9BS34 389 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 DSEQ9UL01 958 aa17.21■□□□□ 0.35
CMTM3-202ENST00000424011 CASTOR2A6NHX0 329 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 DNM1LO00429 736 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 IFNB1P01574 187 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 TGM2P21980 687 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 STIP1P31948 543 aaKnown RBP17.2■□□□□ 0.34
CMTM3-202ENST00000424011 MATKP42679 507 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 AFF1P51825 1210 aaKnown RBP17.2■□□□□ 0.34
CMTM3-202ENST00000424011 RBBP5Q15291 538 aaKnown RBP17.2■□□□□ 0.34
CMTM3-202ENST00000424011 METTL23Q86XA0 190 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 SIX6OS1Q8N1H7 587 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 CENPTQ96BT3 561 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 C9orf72Q96LT7 481 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 XPO6Q96QU8 1125 aaKnown RBP17.2■□□□□ 0.34
CMTM3-202ENST00000424011 OSBPL7Q9BZF2 842 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 SHOC2Q9UQ13 582 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 CEP350Q5VT06 3117 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 SMAPO00193 183 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 FBXO21O94952 628 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 SNUPNO95149 360 aaKnown RBP17.2■□□□□ 0.34
CMTM3-202ENST00000424011 ADIGQ0VDE8 80 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 QPCTQ16769 361 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 EXOC3L1Q86VI1 746 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 CLEC4CQ8WTT0 213 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 SERPINB12Q96P63 405 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 SNRNP25Q9BV90 132 aaKnown RBP17.2■□□□□ 0.34
CMTM3-202ENST00000424011 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.2■□□□□ 0.346e-8■■■■■ 50.5
CMTM3-202ENST00000424011 WBP1LQ9NX94 342 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 CTNNAL1Q9UBT7 734 aa17.2■□□□□ 0.34
CMTM3-202ENST00000424011 APOL1O14791 398 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 MRPS5P82675 430 aaKnown RBP17.19■□□□□ 0.34
CMTM3-202ENST00000424011 TUSC3Q13454 348 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 NOMO1Q15155 1222 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 RAB6CQ53S08 254 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 CLEC20AQ6ZU45 233 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 PAQR9Q6ZVX9 377 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 RBM15Q96T37 977 aaKnown RBP eCLIP17.19■□□□□ 0.34
CMTM3-202ENST00000424011 RAB6CQ9H0N0 254 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 C10orf88Q9H8K7 445 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 PCDH18Q9HCL0 1135 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 CLDN5O00501 218 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 DAB1O75553 588 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 B3GAT3O94766 335 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 POMCP01189 267 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 RBP3P10745 1247 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 CKBP12277 381 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 ZFXP17010 805 aaPredicted RBP17.19■□□□□ 0.34
CMTM3-202ENST00000424011 YWHAZP63104 245 aaKnown RBP17.19■□□□□ 0.34
CMTM3-202ENST00000424011 ROR1Q01973 937 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 MMRN1Q13201 1228 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 SLC25A52Q3SY17 297 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 ECHDC2Q86YB7 292 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 PSTKQ8IV42 348 aaKnown RBP17.19■□□□□ 0.34
CMTM3-202ENST00000424011 C3orf58Q8NDZ4 430 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 ATXN2LQ8WWM7 1075 aaKnown RBP17.19■□□□□ 0.34
CMTM3-202ENST00000424011 FAM149B1Q96BN6 582 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 EBF2Q9HAK2 575 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 CRTAC1Q9NQ79 661 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 KRT82Q9NSB4 513 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 CACNG4Q9UBN1 327 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 STAP1Q9ULZ2 295 aa17.19■□□□□ 0.34
CMTM3-202ENST00000424011 A0A1W2PQ45 241 aaPredicted RBP17.18■□□□□ 0.34
CMTM3-202ENST00000424011 A0A1W2PQY0 241 aa17.18■□□□□ 0.34
CMTM3-202ENST00000424011 MAGEA4P43358 317 aa17.18■□□□□ 0.34
CMTM3-202ENST00000424011 DPYSL2Q16555 572 aa17.18■□□□□ 0.34
CMTM3-202ENST00000424011 SPRED3Q2MJR0 410 aa17.18■□□□□ 0.34
CMTM3-202ENST00000424011 ACCSLQ4AC99 568 aa17.18■□□□□ 0.34
CMTM3-202ENST00000424011 TIGD5Q53EQ6 642 aa17.18■□□□□ 0.34
CMTM3-202ENST00000424011 LACTB2Q53H82 288 aaPredicted RBP17.18■□□□□ 0.34
CMTM3-202ENST00000424011 TTC25Q96NG3 672 aa17.18■□□□□ 0.34
CMTM3-202ENST00000424011 CCDC77Q9BR77 488 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms