RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 RBP3P10745 1247 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 TM4SF4P48230 202 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 VEGFBP49765 207 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 RAP1GDS1P52306 607 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 CDC16Q13042 620 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 DPYSL3Q14195 570 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 C1orf146Q5VVC0 180 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 TMPRSS6Q8IU80 811 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 PYDC1Q8WXC3 89 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 TRAPPC9Q96Q05 1148 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 ECSITQ9BQ95 431 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 CYTH4Q9UIA0 394 aa14.89□□□□□ -0.03
MSH5-206ENST00000423982 LRRIQ4A6NIV6 560 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 ASB14A6NK59 587 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 MAFGO15525 162 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 SNAI1O95863 264 aaPredicted RBP14.88□□□□□ -0.03
MSH5-206ENST00000423982 GSTA2P09210 222 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 SPATA31D3P0C874 917 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 KDELR1P24390 212 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 ZNF132P52740 706 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 MYL6P60660 151 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 CNPY1Q3B7I2 92 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 RASIP1Q5U651 963 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 RNF111Q6ZNA4 994 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 SPATA31D4Q6ZUB0 917 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 EFCAB3Q8N7B9 438 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 EPAS1Q99814 870 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 GORASP1Q9BQQ3 440 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 MSTO1Q9BUK6 570 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 CALN1Q9BXU9 219 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 IQCGQ9H095 443 aaKnown RBP14.88□□□□□ -0.03
MSH5-206ENST00000423982 PDLIM7Q9NR12 457 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 CNTN6Q9UQ52 1028 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 CALB1P05937 261 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 SLC25A3Q00325 362 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 PRKCEQ02156 737 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 DSG1Q02413 1049 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 PIGHQ14442 188 aaPredicted RBP14.88□□□□□ -0.03
MSH5-206ENST00000423982 PTPN20Q4JDL3 420 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 DENND1BQ6P3S1 775 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 MYLK4Q86YV6 388 aaPredicted RBP14.88□□□□□ -0.03
MSH5-206ENST00000423982 POU5F2Q8N7G0 328 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 SPATA33Q96N06 139 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 SMYD3Q9H7B4 428 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 CYP26B1Q9NR63 512 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 SMYD2Q9NRG4 433 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 NDE1Q9NXR1 346 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 DDX56Q9NY93 547 aaKnown RBP14.88□□□□□ -0.03
MSH5-206ENST00000423982 TEX264Q9Y6I9 313 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 ZSWIM8A7E2V4 1837 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 CNTNAP2Q9UHC6 1331 aa14.88□□□□□ -0.03
MSH5-206ENST00000423982 A8MXQ7 604 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 TM7SF2O76062 418 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 SFNP31947 248 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 PTPN7P35236 360 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 TCF7P36402 384 aaPredicted RBP14.87□□□□□ -0.03
MSH5-206ENST00000423982 LAMB3Q13751 1172 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 SMAD1Q15797 465 aaKnown RBP14.87□□□□□ -0.03
MSH5-206ENST00000423982 SH3PXD2AQ5TCZ1 1133 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 LPCAT4Q643R3 524 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 BBS12Q6ZW61 710 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 APLFQ8IW19 511 aaPredicted RBP14.87□□□□□ -0.03
MSH5-206ENST00000423982 SPATA18Q8TC71 538 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 RILPQ96NA2 401 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 TINF2Q9BSI4 451 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 MTMR12Q9C0I1 747 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 CISHQ9NSE2 258 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 ANGPTL2Q9UKU9 493 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 MAGEC1O60732 1142 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 C1QAP02745 245 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 C6orf222P0C671 652 aaPredicted RBP14.87□□□□□ -0.03
MSH5-206ENST00000423982 ACTR3P61158 418 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 PDE1BQ01064 536 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 ZRSR2Q15696 482 aaKnown RBP14.87□□□□□ -0.03
MSH5-206ENST00000423982 CFAP157Q5JU67 520 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 ZBTB33Q86T24 672 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 HIPK4Q8NE63 616 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 E2F7Q96AV8 911 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 MTBPQ96DY7 904 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 UBE2OQ9C0C9 1292 aaKnown RBP14.87□□□□□ -0.03
MSH5-206ENST00000423982 PLAC1Q9HBJ0 212 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 ARID2Q68CP9 1835 aa14.87□□□□□ -0.03
MSH5-206ENST00000423982 A0A0B4J269 797 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 PIK3R2O00459 728 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 PSAPP07602 524 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 MAP2K5Q13163 448 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 RALGPS1Q5JS13 557 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 KCTD6Q8NC69 237 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 TMEM35BQ8NCS4 154 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 HHIPL1Q96JK4 782 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 DDX43Q9NXZ2 648 aaKnown RBP14.86□□□□□ -0.03
MSH5-206ENST00000423982 GABRQQ9UN88 632 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 SPECC1L-ADORA2AF8WAN1 911 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 I3L4J1 428 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 ADCY6O43306 1168 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 LYPLA1O75608 230 aaPredicted RBP14.86□□□□□ -0.03
MSH5-206ENST00000423982 DGAT1O75907 488 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 KRT3P12035 628 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 ICAM3P32942 547 aa14.86□□□□□ -0.03
MSH5-206ENST00000423982 RAP1GAPP47736 663 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms