RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 RHBDD1Q8TEB9 315 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 TMX3Q96JJ7 454 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 MKRN2Q9H000 416 aaKnown RBP17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 NACA2Q9H009 215 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 DMAP1Q9NPF5 467 aaPredicted RBP17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.7■□□□□ 0.428e-7■■■■■ 102.7
CHCHD3-202ENST00000423635 FBXO2Q9UK22 296 aaPredicted RBP17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 FNDC3AQ9Y2H6 1198 aaKnown RBP17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 SRPRBQ9Y5M8 271 aaKnown RBP17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 STON1Q9Y6Q2 735 aa17.7■□□□□ 0.42
CHCHD3-202ENST00000423635 ATP8B3O60423 1300 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 TBX18O95935 607 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 IGLV3-19P01714 112 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 DLATP10515 647 aaKnown RBP17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 ACO1P21399 889 aaKnown RBP17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 ATICP31939 592 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 HOXD13P35453 343 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 PSMD6Q15008 389 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 DCAF12L1Q5VU92 463 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 STXBP4Q6ZWJ1 553 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 SPRYD3Q8NCJ5 442 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 ZMIZ2Q8NF64 920 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 ZNF516Q92618 1163 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 SMARCD1Q96GM5 515 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 CGRRF1Q99675 332 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 TRIM9Q9C026 710 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 XYLT2Q9H1B5 865 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 MIR1-1HGQ9H1L0 117 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 CYLDQ9NQC7 956 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 SLC27A6Q9Y2P4 619 aa17.69■□□□□ 0.42
CHCHD3-202ENST00000423635 ASH1LQ9NR48 2969 aaKnown RBP17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 ZIC2O95409 532 aaPredicted RBP17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 ATP5C1P36542 298 aaKnown RBP17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 TXLNAP40222 546 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 TPMTP51580 245 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 MYL6P60660 151 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 STARD3Q14849 445 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 SUZ12Q15022 739 aaKnown RBP17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 SNRNP35Q16560 246 aaKnown RBP17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 CCDC73Q6ZRK6 1079 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 CCDC65Q8IXS2 484 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 RDH13Q8NBN7 331 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 MED10Q9BTT4 135 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 FBXO44Q9H4M3 255 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 VRTNQ9H8Y1 702 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 CSNK1G1Q9HCP0 422 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 TLR8Q9NR97 1041 aaKnown RBP17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 THAP10Q9P2Z0 257 aaPredicted RBP17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 NXF1Q9UBU9 619 aaKnown RBP17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 LSM7Q9UK45 103 aaKnown RBP17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 CLIC4Q9Y696 253 aa17.68■□□□□ 0.42
CHCHD3-202ENST00000423635 TK2O00142 265 aa17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 GOLGA8FQ08AF8 430 aa17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 GOLGA8DPQ0D2H9 430 aa17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 C19orf57Q0VDD7 668 aa17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 GOLGA4Q13439 2230 aaKnown RBP17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 TRPC3Q13507 836 aa17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 SMAD1Q15797 465 aaKnown RBP17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 TMPRSS6Q8IU80 811 aa17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 FUKQ8N0W3 1084 aa17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 PDCD7Q8N8D1 485 aaKnown RBP17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 SYAP1Q96A49 352 aaPredicted RBP17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 TNIP3Q96KP6 325 aa17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 UBL7Q96S82 380 aaPredicted RBP17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 SMOQ99835 787 aa17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 NUP58Q9BVL2 599 aa17.67■□□□□ 0.42
CHCHD3-202ENST00000423635 E9PAM4 449 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 AP1G2O75843 785 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 BEST1O76090 585 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 IL12RB1P42701 662 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 CDH8P55286 799 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 CYP24A1Q07973 514 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 RABEP1Q15276 862 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 KLHDC10Q6PID8 442 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 Q6ZNB5 142 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 MARCH9Q86YJ5 346 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 ZNF507Q8TCN5 953 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 SIPA1Q96FS4 1042 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 P2RY11Q96G91 374 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 CLIC6Q96NY7 704 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 GZF1Q9H116 711 aaPredicted RBP17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 PCED1AQ9H1Q7 454 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 EIF2B4Q9UI10 523 aaKnown RBP17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 SMC3Q9UQE7 1217 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 CABIN1Q9Y6J0 2220 aa17.66■□□□□ 0.42
CHCHD3-202ENST00000423635 KNL1Q8NG31 2342 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 EIF3DO15371 548 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 TGFB1I1O43294 461 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 TNFSF14O43557 240 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 STAT6P42226 847 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 PLA2G4AP47712 749 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 SNRPFP62306 86 aaKnown RBP17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 PTPRNQ16849 979 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 EPM2AIP1Q7L775 607 aaPredicted RBP17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 PRCCQ92733 491 aaPredicted RBP17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 CCDC127Q96BQ5 260 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 CRELD1Q96HD1 420 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 SMYD3Q9H7B4 428 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 OSGEPQ9NPF4 335 aa17.65■□□□□ 0.42
CHCHD3-202ENST00000423635 AGPAT3Q9NRZ7 376 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms