RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 CXCL16Q9H2A7 254 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 PRDM16Q9HAZ2 1276 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.7□□□□□ -1.18
BDNF-209ENST00000420794 FGF18O76093 207 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 RARAP10276 462 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 RBP3P10745 1247 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 MBL2P11226 248 aaPredicted RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 MAGEA11P43364 429 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 GABRB2P47870 512 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 BASP1P80723 227 aaKnown RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 CAV1Q03135 178 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 TCEAL1Q15170 157 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 TRIP13Q15645 432 aaPredicted RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 SEPT7Q16181 437 aaKnown RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 PCGF5Q86SE9 256 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 CREG2Q8IUH2 290 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 DNAJC5GQ8N7S2 189 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 COLGALT1Q8NBJ5 622 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 ADAM32Q8TC27 787 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 SYT11Q9BT88 431 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 KLC2Q9H0B6 622 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 SUDS3Q9H7L9 328 aaPredicted RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 GPATCH2LQ9NWQ4 482 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 MARCH2Q9P0N8 246 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 HPCAL4Q9UM19 191 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 C2CD4BA6NLJ0 364 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 CYBBP04839 570 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 RARGP13631 454 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 KRT10P13645 584 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 RPL17P18621 184 aaKnown RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 AIF1P55008 147 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 DEFB103AP81534 67 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 PDK1Q15118 436 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 HECTD3Q5T447 861 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 PLPP4Q5VZY2 271 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 MFSD7Q6UXD7 560 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 CROCCP2Q86T23 111 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 C8orf48Q96LL4 319 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 TCF25Q9BQ70 676 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 LRRC1Q9BTT6 524 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 DDX23Q9BUQ8 820 aaKnown RBP7.7□□□□□ -1.18
BDNF-209ENST00000420794 TRIM7Q9C029 511 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 ZCWPW1Q9H0M4 648 aa7.7□□□□□ -1.18
BDNF-209ENST00000420794 GJB5O95377 273 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 KRT14P02533 472 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 MYL4P12829 197 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 KDELR1P24390 212 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 STIP1P31948 543 aaKnown RBP7.69□□□□□ -1.18
BDNF-209ENST00000420794 CCNG2Q16589 344 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 TMCO4Q5TGY1 634 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 NUGGCQ68CJ6 796 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 HERC6Q8IVU3 1022 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 ZNF461Q8TAF7 563 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 FMO2Q99518 471 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 STMN4Q9H169 189 aaPredicted RBP7.69□□□□□ -1.18
BDNF-209ENST00000420794 KLHL8Q9P2G9 620 aaPredicted RBP7.69□□□□□ -1.18
BDNF-209ENST00000420794 SNX24Q9Y343 169 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 BACE2Q9Y5Z0 518 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 SCN10AQ9Y5Y9 1956 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 TULP2O00295 520 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 LRCH4O75427 683 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 ITGB1P05556 798 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 AVPR1AP37288 418 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 COILP38432 576 aaPredicted RBP7.69□□□□□ -1.18
BDNF-209ENST00000420794 MRPS25P82663 173 aaKnown RBP7.69□□□□□ -1.18
BDNF-209ENST00000420794 AMPD2Q01433 879 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 AP1B1Q10567 949 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 TAF10Q12962 218 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 PTP4A2Q12974 167 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 TAB3Q8N5C8 712 aaPredicted RBP7.69□□□□□ -1.18
BDNF-209ENST00000420794 NIPA2Q8N8Q9 360 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 LINC01599Q8WXQ3 324 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 SAMD11Q96NU1 681 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 SMOQ99835 787 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 OSBPL7Q9BZF2 842 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 TKTL2Q9H0I9 626 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 ATXN3LQ9H3M9 355 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 COMMD8Q9NX08 183 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 DNMT3LQ9UJW3 386 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 NAALADL1Q9UQQ1 740 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 LCTP09848 1927 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 TRIM43BA6NCK2 446 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 F5H5T6 163 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 MTSS1O43312 755 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 IVLP07476 585 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 IRF1P10914 325 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 TAS2R40P59535 323 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 SLMAPQ14BN4 828 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 ACBD5Q5T8D3 534 aaPredicted RBP7.69□□□□□ -1.18
BDNF-209ENST00000420794 EMBQ6PCB8 327 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 DDX53Q86TM3 631 aaKnown RBP7.69□□□□□ -1.18
BDNF-209ENST00000420794 TNS4Q8IZW8 715 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 WDTC1Q8N5D0 677 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 NOA1Q8NC60 698 aaKnown RBP7.69□□□□□ -1.18
BDNF-209ENST00000420794 OR10T2Q8NGX3 314 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 GABPB2Q8TAK5 448 aaPredicted RBP7.69□□□□□ -1.18
BDNF-209ENST00000420794 TEKT4Q8WW24 435 aa7.69□□□□□ -1.18
BDNF-209ENST00000420794 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.69□□□□□ -1.18
BDNF-209ENST00000420794 TRIM43Q96BQ3 446 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms