RNA–Protein interactions for RNA: ENST00000420541.6

TNFSF10-202, Transcript of TNF superfamily member 10, humanhuman

TSL 1 (best) BASIC

Gene TNFSF10, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF10-202ENST00000420541 DEUP1Q05D60 604 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 CYP1B1Q16678 543 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 DDR2Q16832 855 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 MGAT5BQ3V5L5 792 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 ERMARDQ5T6L9 678 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 BTBD8Q5XKL5 378 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 CCDC137Q6PK04 289 aaKnown RBP13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 HFE2Q6ZVN8 426 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 C16orf59Q7L2K0 433 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 RFX6Q8HWS3 928 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 CCDC105Q8IYK2 499 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 ARHGAP18Q8N392 663 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 C12orf50Q8NA57 414 aaPredicted RBP13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 ATAD1Q8NBU5 361 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 SLC7A14Q8TBB6 771 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 GRK7Q8WTQ7 553 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 SEPT5Q99719 369 aaPredicted RBP13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 LBHD1Q9BQE6 289 aaPredicted RBP13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 C11orf84Q9BUA3 381 aaPredicted RBP13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 CALN1Q9BXU9 219 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 RAB17Q9H0T7 212 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 FAM204AQ9H8W3 233 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 AMACRQ9UHK6 382 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 NAALADL1Q9UQQ1 740 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 EFR3BQ9Y2G0 817 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 UTP11Q9Y3A2 253 aaKnown RBP13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 NR2E1Q9Y466 385 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
TNFSF10-202ENST00000420541 SYNJ2BP-COX16A0A087WUM0 186 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 C2CD2LO14523 706 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 MDM4O15151 490 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 RTN3O95197 1032 aaPredicted RBP13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 GJB5O95377 273 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 F9P00740 461 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 HAPLN1P10915 354 aaPredicted RBP13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 KRT10P13645 584 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 HNRNPH1P31943 449 aaKnown RBP13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 GBP1P32455 592 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 YWHAGP61981 247 aaKnown RBP eCLIP13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 VSNL1P62760 191 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 IRX1P78414 480 aaPredicted RBP13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 GUCY2DQ02846 1103 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 NME3Q13232 169 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 TFDP2Q14188 446 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 BSPRYQ5W0U4 402 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 SLC8B1Q6J4K2 584 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 RNF19BQ6ZMZ0 732 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 BEND5Q7L4P6 421 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 DDX53Q86TM3 631 aaKnown RBP13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 TTC13Q8NBP0 860 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 SCAMP5Q8TAC9 235 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 C1orf54Q8WWF1 131 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 PEBP4Q96S96 227 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 SLC9A7Q96T83 725 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 NPY6RQ99463 290 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 LRRC19Q9H756 370 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 ABCC13Q9NSE7 274 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 COMMD8Q9NX08 183 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 COX16Q9P0S2 106 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 INSL6Q9Y581 213 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 SLC4A7Q9Y6M7 1214 aa13.05□□□□□ -0.32
TNFSF10-202ENST00000420541 KLHL33A6NCF5 533 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 A6NNZ2 444 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 TNFRSF10BO14763 440 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 SHOX2O60902 331 aaPredicted RBP13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 ENDOD1O94919 500 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 EFEMP2O95967 443 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 OR1D2P34982 312 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 TUFMP49411 452 aaKnown RBP13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 DSG1Q02413 1049 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 CREMQ03060 361 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 KLF1Q13351 362 aaPredicted RBP13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 SNX1Q13596 522 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 SIX1Q15475 284 aaPredicted RBP13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 CCNG2Q16589 344 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 ARL13BQ3SXY8 428 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 TUBB8Q3ZCM7 444 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 SYPL2Q5VXT5 272 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 RSPO2Q6UXX9 243 aaPredicted RBP13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 PSTKQ8IV42 348 aaKnown RBP13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 RNF168Q8IYW5 571 aaPredicted RBP13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 RNF139Q8WU17 664 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 HDAC7Q8WUI4 952 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 EDEM1Q92611 657 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 NT5C3BQ969T7 300 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 SNRNP25Q9BV90 132 aaKnown RBP13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 FRMD8P1Q9BZ68 369 aaPredicted RBP13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 DCLK3Q9C098 648 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 PLEKHA4Q9H4M7 779 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 VPS18Q9P253 973 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 PCYOX1Q9UHG3 505 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 DMGDHQ9UI17 866 aaKnown RBP13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 SSX2IPQ9Y2D8 614 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 SLC27A5Q9Y2P5 690 aa13.04□□□□□ -0.32
TNFSF10-202ENST00000420541 ANKRD33BA6NCL7 494 aa13.03□□□□□ -0.32
TNFSF10-202ENST00000420541 C3orf70A6NLC5 250 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms