RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 AJAP1Q9UKB5 411 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-211ENST00000420363 SMG5Q9UPR3 1016 aaKnown RBP22.42■■□□□ 1.18
CPNE1-211ENST00000420363 DAAM1Q9Y4D1 1078 aa22.42■■□□□ 1.18
CPNE1-211ENST00000420363 CACNA1AO00555 2505 aa22.41■■□□□ 1.18
CPNE1-211ENST00000420363 KIAA1549LQ6ZVL6 1849 aa22.41■■□□□ 1.18
CPNE1-211ENST00000420363 THAP12O43422 761 aa22.41■■□□□ 1.18
CPNE1-211ENST00000420363 FBXO21O94952 628 aa22.41■■□□□ 1.18
CPNE1-211ENST00000420363 LETM1O95202 739 aaPredicted RBP22.41■■□□□ 1.18
CPNE1-211ENST00000420363 ADH1CP00326 375 aa22.41■■□□□ 1.18
CPNE1-211ENST00000420363 GPD2P43304 727 aa22.41■■□□□ 1.18
CPNE1-211ENST00000420363 DAOAP59103 153 aa22.41■■□□□ 1.18
CPNE1-211ENST00000420363 GRSF1Q12849 480 aaKnown RBP eCLIP22.41■■□□□ 1.183e-10■□□□□ 10.9
CPNE1-211ENST00000420363 RSPO4Q2I0M5 234 aaPredicted RBP22.41■■□□□ 1.18
CPNE1-211ENST00000420363 KLHDC7AQ5VTJ3 777 aa22.41■■□□□ 1.18
CPNE1-211ENST00000420363 HTR3DQ70Z44 454 aa22.41■■□□□ 1.18
CPNE1-211ENST00000420363 ADGRG2Q8IZP9 1017 aa22.41■■□□□ 1.18
CPNE1-211ENST00000420363 LIMA1Q9UHB6 759 aaKnown RBP22.41■■□□□ 1.18
CPNE1-211ENST00000420363 CEP250Q9BV73 2442 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 GREM1O60565 184 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 CALCAP01258 141 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 DRD1P21728 446 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 EIF2DP41214 584 aaKnown RBP22.4■■□□□ 1.18
CPNE1-211ENST00000420363 CCR3P51677 355 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 DHCR24Q15392 516 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 ANO6Q4KMQ2 910 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 FKBP15Q5T1M5 1219 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 P2RY13Q9BPV8 354 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 NAA15Q9BXJ9 866 aaKnown RBP22.4■■□□□ 1.18
CPNE1-211ENST00000420363 VPS16Q9H269 839 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 DLL3Q9NYJ7 618 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 PCDHGC3Q9UN70 934 aa22.4■■□□□ 1.18
CPNE1-211ENST00000420363 SART1O43290 800 aaKnown RBP22.39■■□□□ 1.17
CPNE1-211ENST00000420363 UCHL3P15374 230 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 SDHBP21912 280 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 USP8P40818 1118 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 ACADSBP45954 432 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 RGS7P49802 495 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 COPB1P53618 953 aaKnown RBP22.39■■□□□ 1.17
CPNE1-211ENST00000420363 COG7P83436 770 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 PTK2Q05397 1052 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 GAB4Q2WGN9 574 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 BTBD8Q5XKL5 378 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 FSTL4Q6MZW2 842 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 RSRC2Q7L4I2 434 aaKnown RBP22.39■■□□□ 1.17
CPNE1-211ENST00000420363 BBS7Q8IWZ6 715 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 FAM71AQ8IYT1 594 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 AOPEPQ8N6M6 819 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 CD101Q93033 1021 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 FUCA2Q9BTY2 467 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 LSM14BQ9BX40 385 aaKnown RBP22.39■■□□□ 1.17
CPNE1-211ENST00000420363 HSD3B7Q9H2F3 369 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 ABCC13Q9NSE7 274 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 RAB23Q9ULC3 237 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 STRIP2Q9ULQ0 834 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 FHOD1Q9Y613 1164 aa22.39■■□□□ 1.17
CPNE1-211ENST00000420363 MED19A0JLT2 244 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-211ENST00000420363 LRRC10BA6NIK2 292 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 YJEFN3A6XGL0 299 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 LGALS16A8MUM7 142 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 E7ENQ6 273 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 MDM4O15151 490 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 GABBR2O75899 941 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 IRF1P10914 325 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 LCP1P13796 627 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 CXCL12P48061 93 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 BPIFB4P59827 614 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 FBXO43Q4G163 708 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 DENND1BQ6P3S1 775 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 Q6ZNB5 142 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 SPEM1Q8N4L4 309 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 ACP6Q9NPH0 428 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 MARCH2Q9P0N8 246 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 RASAL2Q9UJF2 1139 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 GMEB2Q9UKD1 530 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 NUDT5Q9UKK9 219 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 ZNF510Q9Y2H8 683 aa22.38■■□□□ 1.17
CPNE1-211ENST00000420363 FOXN3O00409 490 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-211ENST00000420363 SCAMP3O14828 347 aaKnown RBP22.37■■□□□ 1.17
CPNE1-211ENST00000420363 HOXC11O43248 304 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-211ENST00000420363 STC2O76061 302 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 PAPSS2O95340 614 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-211ENST00000420363 ADH5P11766 374 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 CLCN1P35523 988 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 OPRD1P41143 372 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 EFEMP1Q12805 493 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 RAPGEF1Q13905 1077 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 DRAP1Q14919 205 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-211ENST00000420363 BSPRYQ5W0U4 402 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 MSANTD2Q6P1R3 559 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 RHBDF2Q6PJF5 856 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 MIB1Q86YT6 1006 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 WBP2Q969T9 261 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 PLD4Q96BZ4 506 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 SLC4A5Q9BY07 1137 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 DCLK3Q9C098 648 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 GANQ9H2C0 597 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 LHX5Q9H2C1 402 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 SPHK2Q9NRA0 654 aa22.37■■□□□ 1.17
CPNE1-211ENST00000420363 RBM12Q9NTZ6 932 aaKnown RBP22.37■■□□□ 1.17
CPNE1-211ENST00000420363 F8VZ95 297 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms