RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 MSANTD4Q8NCY6 345 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 C1orf131Q8NDD1 294 aaKnown RBP13.98□□□□□ -0.17
TMEM248-203ENST00000418375 CSGALNACT1Q8TDX6 532 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 IPO4Q8TEX9 1081 aaKnown RBP13.98□□□□□ -0.17
TMEM248-203ENST00000418375 RNF139Q8WU17 664 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 DDX1Q92499 740 aaKnown RBP13.98□□□□□ -0.17
TMEM248-203ENST00000418375 NDRG1Q92597 394 aaKnown RBP13.98□□□□□ -0.17
TMEM248-203ENST00000418375 PPP1R13BQ96KQ4 1090 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 TRIM62Q9BVG3 475 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 XPO4Q9C0E2 1151 aaKnown RBP13.98□□□□□ -0.17
TMEM248-203ENST00000418375 SYNCQ9H7C4 482 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 GKN1Q9NS71 199 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 ABCC13Q9NSE7 274 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 CYTH4Q9UIA0 394 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 NOCTQ9UK39 431 aaKnown RBP13.98□□□□□ -0.17
TMEM248-203ENST00000418375 STRIP2Q9ULQ0 834 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 SH3BP1Q9Y3L3 701 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 VPS13AQ96RL7 3174 aa13.98□□□□□ -0.17
TMEM248-203ENST00000418375 PTPRZ1P23471 2315 aaPredicted RBP13.97□□□□□ -0.17
TMEM248-203ENST00000418375 ZNF638Q14966 1978 aaKnown RBP13.97□□□□□ -0.17
TMEM248-203ENST00000418375 YJEFN3A6XGL0 299 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 E5RJQ4 531 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 E7ENQ6 273 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 MAN2B1O00754 1011 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 SLC9A3R1O14745 358 aaPredicted RBP13.97□□□□□ -0.17
TMEM248-203ENST00000418375 GABBR2O75899 941 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 LMNAP02545 664 aaKnown RBP13.97□□□□□ -0.17
TMEM248-203ENST00000418375 MMEP08473 750 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 CDH5P33151 784 aaPredicted RBP13.97□□□□□ -0.17
TMEM248-203ENST00000418375 PBX1P40424 430 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 IFNAR2P48551 515 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 TRIM72Q6ZMU5 477 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 SCUBE3Q8IX30 993 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 MAML2Q8IZL2 1156 aaPredicted RBP13.97□□□□□ -0.17
TMEM248-203ENST00000418375 ZNF397Q8NF99 534 aaPredicted RBP13.97□□□□□ -0.17
TMEM248-203ENST00000418375 RIN3Q8TB24 985 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 BAP1Q92560 729 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 CLDN23Q96B33 292 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 ZFYVE19Q96K21 471 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 CPXM1Q96SM3 734 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 DUS2Q9NX74 493 aaKnown RBP13.97□□□□□ -0.17
TMEM248-203ENST00000418375 CFAP97Q9P2B7 532 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 RASAL2Q9UJF2 1139 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 NUDT5Q9UKK9 219 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 CFAP54Q96N23 3096 aa13.97□□□□□ -0.17
TMEM248-203ENST00000418375 NUP210Q8TEM1 1887 aaPredicted RBP13.97□□□□□ -0.17
TMEM248-203ENST00000418375 RIF1Q5UIP0 2472 aaKnown RBP13.96□□□□□ -0.17
TMEM248-203ENST00000418375 OBSL1O75147 1896 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 COL4A3Q01955 1670 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 A0A1W2PQJ5 194 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 E2F8A0AVK6 867 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 LRRC53A6NM62 1247 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 ARNTLO00327 626 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 LTFP02788 710 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 RPS9P46781 194 aaKnown RBP13.96□□□□□ -0.17
TMEM248-203ENST00000418375 KPNA1P52294 538 aaPredicted RBP13.96□□□□□ -0.17
TMEM248-203ENST00000418375 COG7P83436 770 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 ZXDBP98169 803 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 EFEMP1Q12805 493 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 ASIC2Q16515 512 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 SFMBT2Q5VUG0 894 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 MIB1Q86YT6 1006 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 CLEC4CQ8WTT0 213 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 SLC20A1Q8WUM9 679 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 OSCP1Q8WVF1 389 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 ATP2A3Q93084 1043 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 FAM149B1Q96BN6 582 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 MSANTD3Q96H12 275 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 ZFRQ96KR1 1074 aaKnown RBP13.96□□□□□ -0.17
TMEM248-203ENST00000418375 FAM83CQ9BQN1 747 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 KLF16Q9BXK1 252 aaPredicted RBP13.96□□□□□ -0.17
TMEM248-203ENST00000418375 TTYH3Q9C0H2 523 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 NUCKS1Q9H1E3 243 aaKnown RBP13.96□□□□□ -0.17
TMEM248-203ENST00000418375 MARCH2Q9P0N8 246 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 TBC1D14Q9P2M4 693 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 LSM7Q9UK45 103 aaKnown RBP13.96□□□□□ -0.17
TMEM248-203ENST00000418375 FBXO4Q9UKT5 387 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.96□□□□□ -0.17
TMEM248-203ENST00000418375 WNT6Q9Y6F9 365 aa13.96□□□□□ -0.17
TMEM248-203ENST00000418375 DENND4CQ5VZ89 1909 aa13.96□□□□□ -0.18
TMEM248-203ENST00000418375 ITIH6Q6UXX5 1313 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 SHISA7A6NL88 538 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 MDM4O15151 490 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 PAPSS1O43252 624 aaPredicted RBP13.95□□□□□ -0.18
TMEM248-203ENST00000418375 GLI1P08151 1106 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 IRF1P10914 325 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 MLLT6P55198 1093 aaPredicted RBP13.95□□□□□ -0.18
TMEM248-203ENST00000418375 FMO1Q01740 532 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 CSTF1Q05048 431 aaKnown RBP13.95□□□□□ -0.18
TMEM248-203ENST00000418375 RUNX3Q13761 415 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 ITPRIPL2Q3MIP1 535 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 ZNF528Q3MIS6 628 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 PTPN20Q4JDL3 420 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 EFHC1Q5JVL4 640 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 NAA35Q5VZE5 725 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 C1orf228Q6PIY5 440 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 TOGARAM2Q6ZUX3 1019 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 BEND5Q7L4P6 421 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 ERICH1Q86X53 443 aa13.95□□□□□ -0.18
TMEM248-203ENST00000418375 ZDHHC17Q8IUH5 632 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms