RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 MTMR3Q13615 1198 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 C15orf59Q2T9L4 293 aaPredicted RBP7.16□□□□□ -1.26
CPS1-202ENST00000417946 SYPL2Q5VXT5 272 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 TPGS2Q68CL5 300 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 PTCRAQ6ISU1 281 aaPredicted RBP7.16□□□□□ -1.26
CPS1-202ENST00000417946 AADACL2Q6P093 401 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 DAAM2Q86T65 1068 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 CREG2Q8IUH2 290 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 TCEAL8Q8IYN2 117 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 ZDHHC14Q8IZN3 488 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 DEFB106AQ8N104 65 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 MSANTD4Q8NCY6 345 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 ZNF461Q8TAF7 563 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 FAM174AQ8TBP5 190 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 POF1BQ8WVV4 589 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 IRGQQ8WZA9 623 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 ZNF592Q92610 1267 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 POM121Q96HA1 1249 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 SPATA17Q96L03 361 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 CALR3Q96L12 384 aaKnown RBP7.16□□□□□ -1.26
CPS1-202ENST00000417946 CFAP57Q96MR6 1250 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 KLHL5Q96PQ7 755 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 ALS2CR12Q96Q35 445 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 NPY6RQ99463 290 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 DDX23Q9BUQ8 820 aaKnown RBP7.16□□□□□ -1.26
CPS1-202ENST00000417946 SELENOOQ9BVL4 669 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 TTLL2Q9BWV7 592 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 DNAI2Q9GZS0 605 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 NKX2-4Q9H2Z4 354 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 SYNCQ9H7C4 482 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 MRPL47Q9HD33 250 aaKnown RBP7.16□□□□□ -1.26
CPS1-202ENST00000417946 ANLNQ9NQW6 1124 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 SMARCAL1Q9NZC9 954 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 HSFX1Q9UBD0 423 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 FBXW11Q9UKB1 542 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 MTUS1Q9ULD2 1270 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 YIPF1Q9Y548 306 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 MRFAP1Q9Y605 127 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 C2orf16Q68DN1 1984 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 LAMA3Q16787 3333 aa7.16□□□□□ -1.26
CPS1-202ENST00000417946 HELZP42694 1942 aaKnown RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 CTAGE9A4FU28 777 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 C3orf70A6NLC5 250 aaPredicted RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 SLC38A8A6NNN8 435 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 H3BNC9 293 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 TGM5O43548 720 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 LPXNO60711 386 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 HSF2BPO75031 334 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 ENDOD1O94919 500 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 ZBED1O96006 694 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 RB1P06400 928 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 GLI1P08151 1106 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 ATF2P15336 505 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 PRLRP16471 622 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 PSMA2P25787 234 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 CASQ1P31415 396 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 GRIK1P39086 918 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 MATKP42679 507 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 ARSEP51690 589 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 ATXN1P54253 815 aaKnown RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 NAP1L1P55209 391 aaKnown RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 HDAC4P56524 1084 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 UBE3AQ05086 875 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 IFI16Q16666 785 aaKnown RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 ATP13A4Q4VNC1 1196 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 PRPF38BQ5VTL8 546 aaKnown RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 KIAA1841Q6NSI8 718 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 DCUN1D2Q6PH85 259 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 BEND5Q7L4P6 421 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 PEX26Q7Z412 305 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 ADGRD2Q7Z7M1 963 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 TMEM150AQ86TG1 271 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 TAC4Q86UU9 113 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 SCN4BQ8IWT1 228 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 SIX6OS1Q8N1H7 587 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 MRPL43Q8N983 215 aaKnown RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 ZNF511Q8NB15 262 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 KIF18AQ8NI77 898 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 SLC22A17Q8WUG5 538 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 TGS1Q96RS0 853 aaKnown RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 OSBPL9Q96SU4 736 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 TBCBQ99426 244 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 PSMB7Q99436 277 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 SEPT5Q99719 369 aaPredicted RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 TCF25Q9BQ70 676 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 CNPY3Q9BT09 278 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 LRRC3Q9BY71 257 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 LRRC4Q9HBW1 653 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 ZNF334Q9HCZ1 680 aaPredicted RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 WDR6Q9NNW5 1121 aaKnown RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 TLR9Q9NR96 1032 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.15□□□□□ -1.26
CPS1-202ENST00000417946 MRPL17Q9NRX2 175 aaKnown RBP7.15□□□□□ -1.26
CPS1-202ENST00000417946 GMIPQ9P107 970 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 IP6K2Q9UHH9 426 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 NAALADL1Q9UQQ1 740 aa7.15□□□□□ -1.26
CPS1-202ENST00000417946 SCML2Q9UQR0 700 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms