RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 TRIM72Q6ZMU5 477 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 TPRG1Q6ZUI0 275 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 ZNF276Q8N554 614 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 CSGALNACT1Q8TDX6 532 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 RNF139Q8WU17 664 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 OSCP1Q8WVF1 389 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 CPA5Q8WXQ8 436 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 PCDHB18PQ96TA0 734 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 AGPAT1Q99943 283 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 FAM83CQ9BQN1 747 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 EDEM3Q9BZQ6 932 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 SCUBE2Q9NQ36 999 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 ABCC13Q9NSE7 274 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 OLA1Q9NTK5 396 aaKnown RBP13.06□□□□□ -0.32
SKA1-203ENST00000417656 DUS2Q9NX74 493 aaKnown RBP13.06□□□□□ -0.32
SKA1-203ENST00000417656 GTSE1Q9NYZ3 720 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 MARCH2Q9P0N8 246 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 SH3BP1Q9Y3L3 701 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 KMT2EQ8IZD2 1858 aa13.06□□□□□ -0.32
SKA1-203ENST00000417656 SLC12A8A0AV02 714 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 MSI1O43347 362 aaKnown RBP13.05□□□□□ -0.32
SKA1-203ENST00000417656 FYNP06241 537 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 CCDC172P0C7W6 258 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 SOX9P48436 509 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 GOLGA8FQ08AF8 430 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 GOLGA8DPQ0D2H9 430 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 PDGFRLQ15198 375 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 TAF5Q15542 800 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 EML3Q32P44 896 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 SLC44A4Q53GD3 710 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 CWF19L1Q69YN2 538 aaKnown RBP13.05□□□□□ -0.32
SKA1-203ENST00000417656 MSANTD2Q6P1R3 559 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 SARM1Q6SZW1 724 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 MMS22LQ6ZRQ5 1243 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 IRF2BP2Q7Z5L9 587 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 FMNL3Q8IVF7 1028 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 VSTM4Q8IW00 320 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 MSANTD4Q8NCY6 345 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 OLIG1Q8TAK6 271 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 CPLX3Q8WVH0 158 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 SYT11Q9BT88 431 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 MFSD1Q9H3U5 465 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 TBC1D17Q9HA65 648 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 TRPV5Q9NQA5 729 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 SFMBT1Q9UHJ3 866 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 LSM7Q9UK45 103 aaKnown RBP13.05□□□□□ -0.32
SKA1-203ENST00000417656 STRIP2Q9ULQ0 834 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 NAALADL1Q9UQQ1 740 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 PIAS3Q9Y6X2 628 aa13.05□□□□□ -0.32
SKA1-203ENST00000417656 MIA3Q5JRA6 1907 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 E2F8A0AVK6 867 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 OTOL1A6NHN0 477 aaPredicted RBP13.04□□□□□ -0.32
SKA1-203ENST00000417656 GREM1O60565 184 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 GRAP2O75791 330 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 STC2O76061 302 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 UNGP13051 313 aaPredicted RBP13.04□□□□□ -0.32
SKA1-203ENST00000417656 NCAM1P13591 858 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 PRKCIP41743 596 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 KPNA1P52294 538 aaPredicted RBP13.04□□□□□ -0.32
SKA1-203ENST00000417656 CENPCQ03188 943 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 RUNX3Q13761 415 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 CLEC16AQ2KHT3 1053 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 ITPRIPL2Q3MIP1 535 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 TMEM31Q5JXX7 168 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 SPECC1LQ69YQ0 1117 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 TOGARAM2Q6ZUX3 1019 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 TAC4Q86UU9 113 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 ERICH1Q86X53 443 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 XYLT1Q86Y38 959 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 BBS7Q8IWZ6 715 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 CPA6Q8N4T0 437 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 SLC30A5Q8TAD4 765 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 DQX1Q8TE96 717 aaKnown RBP13.04□□□□□ -0.32
SKA1-203ENST00000417656 ATP2A3Q93084 1043 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 IQCDQ96DY2 449 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 C11orf70Q9BRQ4 267 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 C1QTNF1Q9BXJ1 281 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 FOXQ1Q9C009 403 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 LINC00597Q9H2U6 94 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 HAUS4Q9H6D7 363 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 AIPL1Q9NZN9 384 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 CAPN11Q9UMQ6 739 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 KIAA1549LQ6ZVL6 1849 aa13.04□□□□□ -0.32
SKA1-203ENST00000417656 SHISA7A6NL88 538 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 PRR33A8MZF0 331 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 SPECC1L-ADORA2AF8WAN1 911 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 GOLGA8SH3BPF8 625 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 SLC9A3R1O14745 358 aaPredicted RBP13.03□□□□□ -0.32
SKA1-203ENST00000417656 CAPN9O14815 690 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 GPR37L1O60883 481 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 HSF2BPO75031 334 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 DAB1O75553 588 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 NFATC1O95644 943 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 CYP17A1P05093 508 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 SKILP12757 684 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 CD72P21854 359 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 MMP8P22894 467 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 CORO1AP31146 461 aaKnown RBP13.03□□□□□ -0.32
SKA1-203ENST00000417656 CASP14P31944 242 aa13.03□□□□□ -0.32
SKA1-203ENST00000417656 CTHP32929 405 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms