RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 CEP63Q96MT8 703 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 DCLK3Q9C098 648 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 KIAA1257Q9ULG3 409 aa19.38■□□□□ 0.69
VPS16-204ENST00000417508 SGK1O00141 431 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 DCLK1O15075 740 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 CACNG3O60359 315 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 TBXAS1P24557 533 aaPredicted RBP19.37■□□□□ 0.69
VPS16-204ENST00000417508 GBP1P32455 592 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 MPLP40238 635 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 CBWD6Q4V339 395 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 RAB41Q5JT25 222 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 CBWD3Q5JTY5 395 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 CBWD5Q5RIA9 395 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 FOXR2Q6PJQ5 311 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 MDGA1Q8NFP4 955 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 OLIG1Q8TAK6 271 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 SLC35C1Q96A29 364 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 BBS2Q9BXC9 721 aa19.37■□□□□ 0.69
VPS16-204ENST00000417508 GON4LQ3T8J9 2241 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 NUP205Q92621 2012 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 BCLAF3A2AJT9 711 aaKnown RBP19.36■□□□□ 0.69
VPS16-204ENST00000417508 GDF9O60383 454 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 TYRP14679 529 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 CHKAP35790 457 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 PMS1P54277 932 aaKnown RBP19.36■□□□□ 0.69
VPS16-204ENST00000417508 CUL2Q13617 745 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 SF3A2Q15428 464 aaKnown RBP19.36■□□□□ 0.69
VPS16-204ENST00000417508 PMS2CLQ68D20 193 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 IL31Q6EBC2 164 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 PM20D1Q6GTS8 502 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 GRAMD4Q6IC98 578 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 Q6ZNB5 142 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 PIGZQ86VD9 579 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 SFTPA1Q8IWL2 248 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 ZNF513Q8N8E2 541 aaPredicted RBP19.36■□□□□ 0.69
VPS16-204ENST00000417508 ARID3AQ99856 593 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 TPSD1Q9BZJ3 242 aa19.36■□□□□ 0.69
VPS16-204ENST00000417508 DNAJC17Q9NVM6 304 aaKnown RBP19.36■□□□□ 0.69
VPS16-204ENST00000417508 ANTXRLA6NF34 631 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 NEDD8-MDP1E9PL57 170 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 ADAM23O75077 832 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 STC2O76061 302 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 CAVIN2O95810 425 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 CREB5Q02930 508 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 CETN1Q12798 172 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 SGO2Q562F6 1265 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 SPDYCQ5MJ68 293 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 C10orf76Q5T2E6 689 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 SDE2Q6IQ49 451 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 TPGS1Q6ZTW0 290 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 ERCC4Q92889 916 aaPredicted RBP19.35■□□□□ 0.69
VPS16-204ENST00000417508 HESX1Q9UBX0 185 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 NUDT5Q9UKK9 219 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 STRIP2Q9ULQ0 834 aa19.35■□□□□ 0.69
VPS16-204ENST00000417508 TPRP12270 2363 aaKnown RBP19.35■□□□□ 0.69
VPS16-204ENST00000417508 DNAH14Q0VDD8 3507 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 TRIM49BA6NDI0 452 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 XPO1O14980 1071 aaKnown RBP19.34■□□□□ 0.69
VPS16-204ENST00000417508 P4HA2O15460 535 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 ZBTB24O43167 697 aaPredicted RBP19.34■□□□□ 0.69
VPS16-204ENST00000417508 VDRP11473 427 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 HNRNPLP14866 589 aaKnown RBP eCLIP19.34■□□□□ 0.69
VPS16-204ENST00000417508 NTSR1P30989 418 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 P2RY2P41231 377 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 BCAT1P54687 386 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 TTC30AQ86WT1 665 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 MIB1Q86YT6 1006 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 SPACA7Q96KW9 195 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 BCCIPQ9P287 314 aaKnown RBP eCLIP19.34■□□□□ 0.69
VPS16-204ENST00000417508 FBXO10Q9UK96 956 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 INVSQ9Y283 1065 aa19.34■□□□□ 0.69
VPS16-204ENST00000417508 BICDL2A1A5D9 508 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 MDM4O15151 490 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 MAP3K13O43283 966 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 ZBED1O96006 694 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 CISD3P0C7P0 127 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 DPP6P42658 865 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 FMO5P49326 533 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 DGKGP49619 791 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 TKTL1P51854 596 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 YWHAGP61981 247 aaKnown RBP eCLIP19.33■□□□□ 0.68
VPS16-204ENST00000417508 BST2Q10589 180 aaKnown RBP19.33■□□□□ 0.68
VPS16-204ENST00000417508 E2F5Q15329 346 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 CCDC6Q16204 474 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 RSRC2Q7L4I2 434 aaKnown RBP19.33■□□□□ 0.68
VPS16-204ENST00000417508 OLA1Q9NTK5 396 aaKnown RBP19.33■□□□□ 0.68
VPS16-204ENST00000417508 MAN1B1Q9UKM7 699 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 TSPAN16Q9UKR8 245 aa19.33■□□□□ 0.68
VPS16-204ENST00000417508 PLXND1Q9Y4D7 1925 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 TCRBV21S2A2A0A5A6 115 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 GFRA2O00451 464 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 TM4SF5O14894 197 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 PAEPP09466 180 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 PDE4CQ08493 712 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 EFEMP1Q12805 493 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 CCDC40Q4G0X9 1142 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 PPM1JQ5JR12 505 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 STPG1Q5TH74 334 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 LPCAT2Q7L5N7 544 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 SCML4Q8N228 414 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms