RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 TNFRSF4P43489 277 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 IRX4P78413 519 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 MRPS21P82921 87 aaKnown RBP7.37□□□□□ -1.23
COPS3-202ENST00000417352 RPL6Q02878 288 aaKnown RBP7.37□□□□□ -1.23
COPS3-202ENST00000417352 MESP2Q0VG99 397 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 PKP1Q13835 747 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 BYSLQ13895 437 aaKnown RBP7.37□□□□□ -1.23
COPS3-202ENST00000417352 ZNF394Q53GI3 561 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 TRIM61Q5EBN2 209 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 C10orf120Q5SQS8 335 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 SH3PXD2AQ5TCZ1 1133 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 CNNM4Q6P4Q7 775 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 LIMS2Q7Z4I7 341 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 C11orf74Q86VG3 221 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 TMEM25Q86YD3 366 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 MIB1Q86YT6 1006 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 BBS7Q8IWZ6 715 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 CHPFQ8IZ52 775 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 IL17RCQ8NAC3 791 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 PARD3BQ8TEW8 1205 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 HPS1Q92902 700 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 SPATA32Q96LK8 384 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 HEXIM2Q96MH2 286 aaKnown RBP7.37□□□□□ -1.23
COPS3-202ENST00000417352 XPO6Q96QU8 1125 aaKnown RBP7.37□□□□□ -1.23
COPS3-202ENST00000417352 TTLL2Q9BWV7 592 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 LSM14BQ9BX40 385 aaKnown RBP7.37□□□□□ -1.23
COPS3-202ENST00000417352 BBS2Q9BXC9 721 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 NUSAP1Q9BXS6 441 aaKnown RBP7.37□□□□□ -1.23
COPS3-202ENST00000417352 SDCBP2Q9H190 292 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 XYLT2Q9H1B5 865 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 FBXO44Q9H4M3 255 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 TMEM9BQ9NQ34 198 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 SPHK2Q9NRA0 654 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 TMEM30AQ9NV96 361 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 DNAJC17Q9NVM6 304 aaKnown RBP7.37□□□□□ -1.23
COPS3-202ENST00000417352 NAGPAQ9UK23 515 aa7.37□□□□□ -1.23
COPS3-202ENST00000417352 LNP1A1A4G5 178 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 TRIM24O15164 1050 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 CYP26A1O43174 497 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 TLR5O60602 858 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 TULP3O75386 442 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 VNN1O95497 513 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 HLA-DRAP01903 254 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 C4BPAP04003 597 aaKnown RBP7.36□□□□□ -1.23
COPS3-202ENST00000417352 RPN1P04843 607 aaKnown RBP7.36□□□□□ -1.23
COPS3-202ENST00000417352 FAM163BP0C2L3 166 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 TRIM49P0CI25 452 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 TRIM49CP0CI26 452 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 HOXB2P14652 356 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 SNRPBP14678 240 aaKnown RBP7.36□□□□□ -1.23
COPS3-202ENST00000417352 TCF3P15923 654 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 PFKFB1P16118 471 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 SPINK2P20155 84 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 SYKP43405 635 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 GCLMP48507 274 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 VAMP7P51809 220 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 LIMK1P53667 647 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 ARID5AQ03989 594 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 BMT2Q1RMZ1 405 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 LYSMD4Q5XG99 296 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 PMS2CLQ68D20 193 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 GRAMD4Q6IC98 578 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 RSRC2Q7L4I2 434 aaKnown RBP7.36□□□□□ -1.23
COPS3-202ENST00000417352 TRMT11Q7Z4G4 463 aaKnown RBP7.36□□□□□ -1.23
COPS3-202ENST00000417352 RGL4Q8IZJ4 473 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 FUKQ8N0W3 1084 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 PLEKHO2Q8TD55 490 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 OVCA2Q8WZ82 227 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 CYFIP2Q96F07 1278 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 EEF2KMTQ96G04 330 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 CNOT6LQ96LI5 555 aaKnown RBP7.36□□□□□ -1.23
COPS3-202ENST00000417352 FSCN3Q9NQT6 498 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 PLK2Q9NYY3 685 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 HMGXB4Q9UGU5 601 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 MORC2Q9Y6X9 1032 aaPredicted RBP7.36□□□□□ -1.23
COPS3-202ENST00000417352 CEP192Q8TEP8 1941 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 KIAA1549LQ6ZVL6 1849 aa7.36□□□□□ -1.23
COPS3-202ENST00000417352 ADAMTS9Q9P2N4 1935 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 A0A1W2PQH9 124 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 GOLGA6L4A6NEF3 574 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 PDXKO00764 312 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 MDM4O15151 490 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 AP5Z1O43299 807 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 STAU1O95793 577 aaKnown RBP7.35□□□□□ -1.23
COPS3-202ENST00000417352 RALAP11233 206 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 RARGP13631 454 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 TYRP14679 529 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 HNRNPLP14866 589 aaKnown RBP eCLIP7.35□□□□□ -1.23
COPS3-202ENST00000417352 ITPKAP23677 461 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 NR2F2P24468 414 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 RPL13P26373 211 aaKnown RBP7.35□□□□□ -1.23
COPS3-202ENST00000417352 PTGER3P43115 390 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 DGKGP49619 791 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 PGFP49763 221 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 SLC8A3P57103 927 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 KRT85P78386 507 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 SKOR1P84550 965 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 GFPT1Q06210 699 aaPredicted RBP7.35□□□□□ -1.23
COPS3-202ENST00000417352 ZNF252P-AS1Q0IIN9 211 aa7.35□□□□□ -1.23
COPS3-202ENST00000417352 EFEMP1Q12805 493 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms