RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PRKAG2Q9UGJ0 569 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 FAM86B1E9PN63 330 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 KRT36O76013 467 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 PECAM1P16284 738 aaPredicted RBP12.39□□□□□ -0.43
UBR4-205ENST00000417040 ABCG1P45844 678 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 CDK16Q00536 496 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 ITGB3BPQ13352 177 aaPredicted RBP12.39□□□□□ -0.43
UBR4-205ENST00000417040 TAF2Q6P1X5 1199 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 ZCCHC7Q8N3Z6 543 aaKnown RBP12.39□□□□□ -0.43
UBR4-205ENST00000417040 PWWP2AQ96N64 755 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 ZNF184Q99676 751 aaPredicted RBP12.39□□□□□ -0.43
UBR4-205ENST00000417040 CRLS1Q9UJA2 301 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 MYRFQ9Y2G1 1151 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 IPPQ9Y573 584 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
UBR4-205ENST00000417040 SPHKAPQ2M3C7 1700 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 KPNA4O00629 521 aaPredicted RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 CAPN1P07384 714 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 FASP25445 335 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 ACADSBP45954 432 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 UBAP2LQ14157 1087 aaKnown RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 FASTKQ14296 549 aaKnown RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 TMEM26Q6ZUK4 368 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 LRRN4Q8WUT4 740 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 GPRASP2Q96D09 838 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 ZNF512Q96ME7 567 aaPredicted RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 RNF145Q96MT1 663 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 SRPK1Q96SB4 655 aaKnown RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 GPAMQ9HCL2 828 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 PREX2Q70Z35 1606 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 ABCA6Q8N139 1617 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 DYNC1LI2O43237 492 aaPredicted RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 POU6F1Q14863 301 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 NFIXQ14938 502 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 CCNG2Q16589 344 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 SV2CQ496J9 727 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 FAM131BQ86XD5 332 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 PCDH20Q8N6Y1 951 aaKnown RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 SAE1Q9UBE0 346 aaPredicted RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 CLOCKO15516 846 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 ENTPD5O75356 428 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 NELFEP18615 380 aaKnown RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 PREPLQ4J6C6 727 aaPredicted RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 ZNF57Q68EA5 555 aaPredicted RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 SH3BP5LQ7L8J4 393 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 KBTBD2Q8IY47 623 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 RAB42Q8N4Z0 105 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 CHST7Q9NS84 486 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 KBTBD4Q9NVX7 518 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 MRPL39Q9NYK5 338 aaKnown RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 SLC24A2Q9UI40 661 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 CNOT7Q9UIV1 285 aaKnown RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 DNPEPQ9ULA0 475 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 NEO1Q92859 1461 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 TET3O43151 1660 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 A0A0A6YYK5 440 aaPredicted RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 PROSCO94903 275 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 SLC2A4P14672 509 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 CYP2F1P24903 491 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 RRM2P31350 389 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 TCF7P36402 384 aaPredicted RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 LSM3P62310 102 aaKnown RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 HPCAP84074 193 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 ZSWIM7Q19AV6 140 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 AKIRIN2Q53H80 203 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 PERM1Q5SV97 790 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 SIX5Q8N196 739 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 CELF6Q96J87 481 aaKnown RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 PLA2G12BQ9BX93 195 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 ABI2Q9NYB9 513 aaPredicted RBP12.38□□□□□ -0.43
UBR4-205ENST00000417040 MAP2K7O14733 419 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 CDH24Q86UP0 819 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 SEPT12Q8IYM1 358 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 APOPT1Q96IL0 206 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 MPP6Q9NZW5 540 aa12.38□□□□□ -0.43
UBR4-205ENST00000417040 DDHD2O94830 711 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 DGCR6Q14129 220 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 QPCTQ16769 361 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 SLFN11Q7Z7L1 901 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 CENPTQ96BT3 561 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 LRRC39Q96DD0 335 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 SMARCAD1Q9H4L7 1026 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 RAD18Q9NS91 495 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 CLIC5Q9NZA1 410 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 POLG2Q9UHN1 485 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 SNX8Q9Y5X2 465 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 MADDQ8WXG6 1647 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 TAF4O00268 1085 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 TROAPQ12815 778 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 PDZK1Q5T2W1 519 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 SEPT1Q8WYJ6 367 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 PLEKHG4BQ96PX9 1271 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 LRRC40Q9H9A6 602 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 TMEM165Q9HC07 324 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 ALKQ9UM73 1620 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 ANXA9O76027 345 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 KLHL18O94889 574 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 FLT3P36888 993 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 PLK1P53350 603 aa12.37□□□□□ -0.43
UBR4-205ENST00000417040 IRGCQ6NXR0 463 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms