RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 TRABD2AQ86V40 505 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 CCDC103Q8IW40 242 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 FAM172AQ8WUF8 416 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 MARK4Q96L34 752 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 CATSPER2Q96P56 530 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 ROGDIQ9GZN7 287 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 KLHL25Q9H0H3 589 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 COPS7BQ9H9Q2 264 aaPredicted RBP13.28□□□□□ -0.28
SCN1B-202ENST00000415950 PPCSQ9HAB8 311 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 SLC30A1Q9Y6M5 507 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 MST1RQ04912 1400 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 DLGAP3O95886 979 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 PSMC3P17980 439 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 RBL1P28749 1068 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 TWF1Q12792 350 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 DDX39BQ13838 428 aaKnown RBP13.28□□□□□ -0.28
SCN1B-202ENST00000415950 PDK1Q15118 436 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 PDK4Q16654 411 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 C15orf59Q2T9L4 293 aaPredicted RBP13.28□□□□□ -0.28
SCN1B-202ENST00000415950 WLSQ5T9L3 541 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 TTC30AQ86WT1 665 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 APPL2Q8NEU8 664 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 HPDLQ96IR7 371 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 CDRT15Q96T59 188 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 NMUR2Q9GZQ4 415 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 GID8Q9NWU2 228 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 FZD1Q9UP38 647 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 PRRC2BQ5JSZ5 2229 aaKnown RBP13.28□□□□□ -0.28
SCN1B-202ENST00000415950 F8W8V4 182 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 CDH2P19022 906 aaPredicted RBP13.28□□□□□ -0.28
SCN1B-202ENST00000415950 FOXN2P32314 431 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 MRPL28Q13084 256 aaKnown RBP13.28□□□□□ -0.28
SCN1B-202ENST00000415950 CCDC142Q17RM4 750 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 PDPK2PQ6A1A2 396 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 PLEKHA7Q6IQ23 1121 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 RIPOR1Q6ZS17 1223 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 ARHGAP22Q7Z5H3 698 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 SEPT1Q8WYJ6 367 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 LRRC19Q9H756 370 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 SHOC2Q9UQ13 582 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 STARD13Q9Y3M8 1113 aa13.28□□□□□ -0.28
SCN1B-202ENST00000415950 EDF1O60869 148 aaKnown RBP13.27□□□□□ -0.28
SCN1B-202ENST00000415950 HIST1H2AGP0C0S8 130 aaPredicted RBP13.27□□□□□ -0.28
SCN1B-202ENST00000415950 HSPA1AP0DMV8 641 aaKnown RBP13.27□□□□□ -0.28
SCN1B-202ENST00000415950 HSPA1BP0DMV9 641 aaKnown RBP13.27□□□□□ -0.28
SCN1B-202ENST00000415950 HIST1H2ADP20671 130 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 ATP6V1C1P21283 382 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 RPL22P35268 128 aaKnown RBP13.27□□□□□ -0.28
SCN1B-202ENST00000415950 PLK1P53350 603 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 ATF7IP2Q5U623 682 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 FAM71AQ8IYT1 594 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 RASGEF1CQ8N431 466 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 IL31RAQ8NI17 732 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 OPTNQ96CV9 577 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 HIST1H2AHQ96KK5 128 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 HIST1H2AJQ99878 128 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 H2AFJQ9BTM1 129 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 GLIS2Q9BZE0 524 aaPredicted RBP13.27□□□□□ -0.28
SCN1B-202ENST00000415950 TSPAN3O60637 253 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 C6orf222P0C671 652 aaPredicted RBP13.27□□□□□ -0.28
SCN1B-202ENST00000415950 GLRA2P23416 452 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 RXRBP28702 533 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 NRLP54845 237 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 LAMC2Q13753 1193 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 LPCAT4Q643R3 524 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 GPR141Q7Z602 305 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 ADCK2Q7Z695 626 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 SCUBE3Q8IX30 993 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 UCMAQ8WVF2 138 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 TEX13BQ9BXU2 312 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 EFCAB1Q9HAE3 211 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 ANKEF1Q9NU02 776 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 GRHL1Q9NZI5 618 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 KLK14Q9P0G3 267 aa13.27□□□□□ -0.28
SCN1B-202ENST00000415950 CYB561D2O14569 222 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 LYPLA1O75608 230 aaPredicted RBP13.27□□□□□ -0.29
SCN1B-202ENST00000415950 CPA3P15088 417 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 MIPP30301 263 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 AKT1P31749 480 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 STX5Q13190 355 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 MAMLD1Q13495 774 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 C16orf72Q14CZ0 275 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 R3HDM1Q15032 1099 aaKnown RBP13.27□□□□□ -0.29
SCN1B-202ENST00000415950 GOLGA7BQ2TAP0 167 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 APOBEC3HQ6NTF7 200 aaKnown RBP13.27□□□□□ -0.29
SCN1B-202ENST00000415950 RFWD3Q6PCD5 774 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 CLNKQ7Z7G1 428 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 BTN2A2Q8WVV5 523 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 CRAMP1Q96RY5 1269 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 NCF1BA6NI72 391 aaPredicted RBP13.27□□□□□ -0.29
SCN1B-202ENST00000415950 SAC3D1A6NKF1 404 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 NCF1CA8MVU1 366 aaPredicted RBP13.27□□□□□ -0.29
SCN1B-202ENST00000415950 FSCN2O14926 492 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 NCAM1P13591 858 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 NCF1P14598 390 aaPredicted RBP13.27□□□□□ -0.29
SCN1B-202ENST00000415950 DGKZQ13574 1117 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 FAM83EQ2M2I3 478 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 LACTB2Q53H82 288 aaPredicted RBP13.27□□□□□ -0.29
SCN1B-202ENST00000415950 RNF43Q68DV7 783 aa13.27□□□□□ -0.29
SCN1B-202ENST00000415950 SYTL5Q8TDW5 730 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms