RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 IL31Q6EBC2 164 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 FAM186BQ8IYM0 893 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 RBBP8NLQ8NC74 664 aaPredicted RBP13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 CCDC26Q8TAB7 109 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 JAKMIP2Q96AA8 810 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 TIGD1Q96MW7 591 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 EDEM2Q9BV94 578 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 NT5C1AQ9BXI3 368 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 DUSP16Q9BY84 665 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 FBXO44Q9H4M3 255 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 CYP3A43Q9HB55 503 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 TLR8Q9NR97 1041 aaKnown RBP13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 DEC1Q9P2X7 70 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 CLEC4EQ9ULY5 219 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 SH3BP1Q9Y3L3 701 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 GON4LQ3T8J9 2241 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 ASCC3Q8N3C0 2202 aaKnown RBP13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 CACNA1BQ00975 2339 aa13.1□□□□□ -0.31
NCKIPSD-203ENST00000415281 TBC1D3BA6NDS4 549 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 GABBR2O75899 941 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 STC2O76061 302 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 TOP3BO95985 862 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 P4HA1P13674 534 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 TYRP14679 529 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 PSMC2P35998 433 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 ATP5C1P36542 298 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 PMS1P54277 932 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 ZNF394Q53GI3 561 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 RAB41Q5JT25 222 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 CBWD3Q5JTY5 395 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 EOGTQ5NDL2 527 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 CBWD5Q5RIA9 395 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 ISM2Q6H9L7 571 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 KLHDC10Q6PID8 442 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 INTS8Q75QN2 995 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 CCDC186Q7Z3E2 898 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 TTC30AQ86WT1 665 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 ZC3H3Q8IXZ2 948 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 UBR7Q8N806 425 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 KCNV2Q8TDN2 545 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 NDRG1Q92597 394 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 NIF3L1Q9GZT8 377 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 SLC6A17Q9H1V8 727 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 MMRN2Q9H8L6 949 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 TMEM8AQ9HCN3 771 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 PNPLA8Q9NP80 782 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 HOOK1Q9UJC3 728 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 PILRBQ9UKJ0 227 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 FRMD4BQ9Y2L6 1034 aa13.09□□□□□ -0.31
NCKIPSD-203ENST00000415281 TCRBV21S2A2A0A5A6 115 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 SMC2O95347 1197 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 PRCPP42785 496 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 DHPSP49366 369 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 SHC2P98077 582 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 ANO4Q32M45 955 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 C10orf76Q5T2E6 689 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 FYB2Q5VWT5 728 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 CLEC17AQ6ZS10 378 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 TPGS1Q6ZTW0 290 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 SLC41A1Q8IVJ1 513 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 DEFB119Q8N690 84 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 ZNF513Q8N8E2 541 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 SPATA20Q8TB22 786 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 HMGB4Q8WW32 186 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 DDX1Q92499 740 aaKnown RBP13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 PIGKQ92643 395 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 SMARCE1Q969G3 411 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 ERLEC1Q96DZ1 483 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 GABRG3Q99928 467 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 FSCN3Q9NQT6 498 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 CISHQ9NSE2 258 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 PLK2Q9NYY3 685 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 COQ4Q9Y3A0 265 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 PCDHA5Q9Y5H7 936 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 CHD6Q8TD26 2715 aa13.08□□□□□ -0.32
NCKIPSD-203ENST00000415281 IGHV1OR15-9A0A0B4J2B8 117 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 NEDD8-MDP1E9PL57 170 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 GFRA2O00451 464 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 KHNYNO15037 678 aaKnown RBP13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 PENKP01210 267 aaPredicted RBP13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 ITPKAP23677 461 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 NTSR1P30989 418 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 GTF2H1P32780 548 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 PLA2G4AP47712 749 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 ENPP2Q13822 863 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 CAMK4Q16566 473 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 GEN1Q17RS7 908 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 EDRF1Q3B7T1 1238 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 ARHGAP17Q68EM7 881 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 KRT39Q6A163 491 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 ANKRD40Q6AI12 368 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 PM20D1Q6GTS8 502 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 PSAPL1Q6NUJ1 521 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 ARMCX6Q7L4S7 300 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 PIGZQ86VD9 579 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 C11orf74Q86VG3 221 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 GBP4Q96PP9 640 aa13.07□□□□□ -0.32
NCKIPSD-203ENST00000415281 BBS2Q9BXC9 721 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms