RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 KIF21AQ7Z4S6 1674 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 GCC2Q8IWJ2 1684 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 EHBP1L1Q8N3D4 1523 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 CYP2D7A0A087X1C5 515 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 WDR91A4D1P6 747 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 H3BNC9 293 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 SPRY2O43597 315 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 PRC1O43663 620 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 TMPRSS11DO60235 418 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 A1BGP04217 495 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 PARP1P09874 1014 aaKnown RBP4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 HSPA5P11021 654 aaKnown RBP4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 CREB1P16220 341 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 FPR3P25089 353 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 MPGP29372 298 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 CARSP49589 748 aaKnown RBP4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 MTHFSP49914 203 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 RENBPP51606 427 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 ALDH5A1P51649 535 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 HTRA4P83105 476 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 FAM187BQ17R55 369 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 CERKLQ49MI3 558 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 LRCH2Q5VUJ6 765 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 ZNF425Q6IV72 752 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 SLC18B1Q6NT16 456 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 SERPINA13PQ6UXR4 307 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 ZNF813Q6ZN06 617 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 DPY19L3Q6ZPD9 716 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 NGDNQ8NEJ9 315 aaKnown RBP4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 ZNF398Q8TD17 642 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 FAM227BQ96M60 508 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 QTRT1Q9BXR0 403 aaKnown RBP4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 NRIP3Q9NQ35 241 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 SNX15Q9NRS6 342 aa4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 ZNF70Q9UC06 446 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P23-201ENST00000414981 ABCA10Q8WWZ4 1543 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 SNAPC4Q5SXM2 1469 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 RPRD2Q5VT52 1461 aaKnown RBP4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 MTUS2Q5JR59 1369 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 WDR17Q8IZU2 1322 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 A8MVJ9 347 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 AREL1O15033 823 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 SNX2O60749 519 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 IL18RAPO95256 599 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 ANXA2P07355 339 aaKnown RBP4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 CYP2A6P11509 494 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 HGFP14210 728 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 EPHB2P29323 1055 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 DIO1P49895 249 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 ZNF81P51508 661 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 CFHR3Q02985 330 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 LMAN2Q12907 356 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 UBE4AQ14139 1066 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 DAZAP2Q15038 168 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 MORN5Q5VZ52 161 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 ZNF626Q68DY1 528 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 ZNF280DQ6N043 979 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 C11orf87Q6NUJ2 197 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 RNF44Q7L0R7 432 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 YTHDF3Q7Z739 585 aaKnown RBP4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 LINC01465Q8N7H1 131 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 C5orf34Q96MH7 638 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 HIST1H2AAQ96QV6 131 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 ASIC5Q9NY37 505 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 DNAJB11Q9UBS4 358 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 SWAP70Q9UH65 585 aa4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 SUPT6HQ7KZ85 1726 aaKnown RBP4.31□□□□□ -1.72
HMGB3P23-201ENST00000414981 BRD4O60885 1362 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 F8W8V4 182 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 USP1O94782 785 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 ITGA8P53708 1063 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 LMOD3Q0VAK6 560 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 STK3Q13188 491 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 DAG1Q14118 895 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 HLTFQ14527 1009 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 DHX8Q14562 1220 aaKnown RBP4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 CLCA4Q14CN2 919 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 ST3GAL2Q16842 350 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 CCDC96Q2M329 555 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 MANEALQ5VSG8 457 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 KRT28Q7Z3Y7 464 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 PCGF5Q86SE9 256 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 FTSJ3Q8IY81 847 aaKnown RBP4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 C12orf76Q8N812 135 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 C8orf48Q96LL4 319 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 ZNF778Q96MU6 729 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 MMS19Q96T76 1030 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 TMEM79Q9BSE2 394 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 PRSS22Q9GZN4 317 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 ZNF212Q9UDV6 495 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 STEAP1Q9UHE8 339 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 PCDHGB6Q9Y5F9 930 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 SNX13Q9Y5W8 968 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 SAMD9Q5K651 1589 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 UGGT2Q9NYU1 1516 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 GRIN2BQ13224 1484 aa4.3□□□□□ -1.72
HMGB3P23-201ENST00000414981 COL15A1P39059 1388 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 LRPPRCP42704 1394 aaKnown RBP4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 ANKRD30BQ9BXX2 1392 aa4.29□□□□□ -1.72
HMGB3P23-201ENST00000414981 RPGRIP1LQ68CZ1 1315 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms