RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 PAXBP1Q9Y5B6 917 aa13.72□□□□□ -0.21
CNOT4-204ENST00000414802 CLUHO75153 1309 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 CCP110O43303 1012 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 GLI1P08151 1106 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 PDGFRAP16234 1089 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 GPD1P21695 349 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 SULT1E1P49888 294 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 EFEMP1Q12805 493 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 KIF5AQ12840 1032 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 CDO1Q16878 200 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 C10orf120Q5SQS8 335 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 OTUD1Q5VV17 481 aaPredicted RBP13.71□□□□□ -0.21
CNOT4-204ENST00000414802 DAB2IPQ5VWQ8 1189 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 GET4Q7L5D6 327 aaPredicted RBP13.71□□□□□ -0.21
CNOT4-204ENST00000414802 TAC4Q86UU9 113 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 RHOT2Q8IXI1 618 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 MRPS31Q92665 395 aaKnown RBP13.71□□□□□ -0.21
CNOT4-204ENST00000414802 SLC22A12Q96S37 553 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 ADAM7Q9H2U9 754 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 GOLPH3Q9H4A6 298 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 ABCC13Q9NSE7 274 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 UVRAGQ9P2Y5 699 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 SFMBT1Q9UHJ3 866 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 CD207Q9UJ71 328 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 RASAL2Q9UJF2 1139 aa13.71□□□□□ -0.21
CNOT4-204ENST00000414802 MRPS23Q9Y3D9 190 aaKnown RBP13.71□□□□□ -0.21
CNOT4-204ENST00000414802 TMEM191CA6NGB0 347 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 MSI1O43347 362 aaKnown RBP13.7□□□□□ -0.22
CNOT4-204ENST00000414802 MOCS3O95396 460 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 OAS1P00973 400 aaKnown RBP13.7□□□□□ -0.22
CNOT4-204ENST00000414802 RALAP11233 206 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 PSMA2P25787 234 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 MATKP42679 507 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 NAP1L1P55209 391 aaKnown RBP13.7□□□□□ -0.22
CNOT4-204ENST00000414802 ATP11AP98196 1134 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 ARHGAP29Q52LW3 1261 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 HECTD3Q5T447 861 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 GPR158Q5T848 1215 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 SH3PXD2AQ5TCZ1 1133 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 CES5AQ6NT32 575 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 POTEHQ6S545 545 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 REXO1L1PQ8IX06 675 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 TXLNBQ8N3L3 684 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 MAB21L3Q8N8X9 362 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 SMRP1Q8NCR6 262 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 DQX1Q8TE96 717 aaKnown RBP13.7□□□□□ -0.22
CNOT4-204ENST00000414802 RNF139Q8WU17 664 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 TBCBQ99426 244 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 DDX23Q9BUQ8 820 aaKnown RBP13.7□□□□□ -0.22
CNOT4-204ENST00000414802 SLITRK6Q9H5Y7 841 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 FAM204AQ9H8W3 233 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 CLIC5Q9NZA1 410 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.7□□□□□ -0.22
CNOT4-204ENST00000414802 CALCOCO1Q9P1Z2 691 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 DOCK4Q8N1I0 1966 aa13.7□□□□□ -0.22
CNOT4-204ENST00000414802 TCF20Q9UGU0 1960 aaKnown RBP13.7□□□□□ -0.22
CNOT4-204ENST00000414802 COL6A3P12111 3177 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 A0A0A6YYK5 440 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-204ENST00000414802 ZSCAN12O43309 604 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 COCHO43405 550 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 FSHRP23945 695 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 SDC4P31431 198 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 PSEN1P49768 467 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 ATXN1P54253 815 aaKnown RBP13.69□□□□□ -0.22
CNOT4-204ENST00000414802 ITIH3Q06033 890 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 MESDQ14696 234 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 CCDC14Q49A88 953 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 HS1BP3Q53T59 392 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 SNX30Q5VWJ9 437 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 MIB1Q86YT6 1006 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 CCAR2Q8N163 923 aaKnown RBP13.69□□□□□ -0.22
CNOT4-204ENST00000414802 ARL14EPQ8N8R7 260 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-204ENST00000414802 LEMD2Q8NC56 503 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 CYP2S1Q96SQ9 504 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 NACA2Q9H009 215 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 SMG9Q9H0W8 520 aaKnown RBP13.69□□□□□ -0.22
CNOT4-204ENST00000414802 POMKQ9H5K3 350 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 WDR6Q9NNW5 1121 aaKnown RBP13.69□□□□□ -0.22
CNOT4-204ENST00000414802 ZKSCAN5Q9Y2L8 839 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 USP15Q9Y4E8 981 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-204ENST00000414802 MIA3Q5JRA6 1907 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 GRXCR2A6NFK2 248 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 BTNL10A8MVZ5 291 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 DPYSL4O14531 572 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 KRT86O43790 486 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 MTA2O94776 668 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 FGF19O95750 216 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 HMBSP08397 361 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 MBL2P11226 248 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-204ENST00000414802 SP100P23497 879 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-204ENST00000414802 NOS2P35228 1153 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 PPP3CCP48454 512 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 CBX2Q14781 532 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-204ENST00000414802 ARHGAP15Q53QZ3 475 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 ATAT1Q5SQI0 421 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 MSANTD2Q6P1R3 559 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 TTC16Q8NEE8 873 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 MAFAQ8NHW3 353 aaPredicted RBP13.69□□□□□ -0.22
CNOT4-204ENST00000414802 TPCN2Q8NHX9 752 aa13.69□□□□□ -0.22
CNOT4-204ENST00000414802 FAM172AQ8WUF8 416 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms