RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 PMLP29590 882 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 PTGIRP43119 386 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 YARSP54577 528 aaKnown RBP17.93■□□□□ 0.46
PTPRC-206ENST00000413409 HLTFQ14527 1009 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTPRC-206ENST00000413409 UBXN2BQ14CS0 331 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 STILQ15468 1287 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 LPAL2Q16609 132 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 ZNF394Q53GI3 561 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 DENND1BQ6P3S1 775 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 SPATA31D4Q6ZUB0 917 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 GOLGA6L1Q8N7Z2 621 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 TSEN2Q8NCE0 465 aaKnown RBP17.93■□□□□ 0.46
PTPRC-206ENST00000413409 FGF14Q92915 247 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 MAGOHBQ96A72 148 aaKnown RBP17.93■□□□□ 0.46
PTPRC-206ENST00000413409 TMEM176AQ96HP8 235 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 ERP44Q9BS26 406 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 ELOVL4Q9GZR5 314 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 LRRC19Q9H756 370 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTPRC-206ENST00000413409 GMEB2Q9UKD1 530 aa17.93■□□□□ 0.46
PTPRC-206ENST00000413409 AGPSO00116 658 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 C2CD2LO14523 706 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 POLR3GO15318 223 aaPredicted RBP17.92■□□□□ 0.46
PTPRC-206ENST00000413409 OPA1O60313 960 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 SYF2O95926 243 aaKnown RBP17.92■□□□□ 0.46
PTPRC-206ENST00000413409 FAM153BP0C7A2 387 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 DMWDQ09019 674 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 MYO1EQ12965 1108 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 FAM153CQ494X1 144 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 SLC44A4Q53GD3 710 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 C2CD6Q53TS8 623 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 NOMO2Q5JPE7 1267 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 SPDYCQ5MJ68 293 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 PARM1Q6UWI2 310 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 GET4Q7L5D6 327 aaPredicted RBP17.92■□□□□ 0.46
PTPRC-206ENST00000413409 TAS1R1Q7RTX1 841 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 WDTC1Q8N5D0 677 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 BEST2Q8NFU1 509 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 EXD1Q8NHP7 514 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 FNIP1Q8TF40 1166 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 PKNOX2Q96KN3 472 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 RUFY1Q96T51 708 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 OSBPL6Q9BZF3 934 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 MRPL17Q9NRX2 175 aaKnown RBP17.92■□□□□ 0.46
PTPRC-206ENST00000413409 FAM153AQ9UHL3 310 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.92■□□□□ 0.46
PTPRC-206ENST00000413409 INPP5FQ9Y2H2 1132 aa17.92■□□□□ 0.46
PTPRC-206ENST00000413409 GOLGA8KD6RF30 607 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 TEX28O15482 410 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 DAPK3O43293 454 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 GDF9O60383 454 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 RNF40O75150 1001 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 DDHD2O94830 711 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 RARAP10276 462 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 COILP38432 576 aaPredicted RBP17.91■□□□□ 0.46
PTPRC-206ENST00000413409 GGCXP38435 758 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 PIGHQ14442 188 aaPredicted RBP17.91■□□□□ 0.46
PTPRC-206ENST00000413409 MLF2Q15773 248 aaPredicted RBP17.91■□□□□ 0.46
PTPRC-206ENST00000413409 ZBTB6Q15916 424 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 PTPN20Q4JDL3 420 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 SYDE1Q6ZW31 735 aaPredicted RBP17.91■□□□□ 0.46
PTPRC-206ENST00000413409 ADAT2Q7Z6V5 191 aaKnown RBP17.91■□□□□ 0.46
PTPRC-206ENST00000413409 EXOC4Q96A65 974 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 TWNKQ96RR1 684 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 TRIM51Q9BSJ1 452 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 PLEKHA4Q9H4M7 779 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 LTB4R2Q9NPC1 389 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 HOMER3Q9NSC5 361 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 SNTG2Q9NY99 539 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 PSD3Q9NYI0 1048 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 PARP2Q9UGN5 583 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 FAN1Q9Y2M0 1017 aa17.91■□□□□ 0.46
PTPRC-206ENST00000413409 DOCK6Q96HP0 2047 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 O00370 1275 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 XPOTO43592 962 aaKnown RBP17.9■□□□□ 0.46
PTPRC-206ENST00000413409 PTPN7P35236 360 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 CETN2P41208 172 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 AFF1P51825 1210 aaKnown RBP17.9■□□□□ 0.46
PTPRC-206ENST00000413409 GUCY2FP51841 1108 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 CDH8P55286 799 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 TAS2R40P59535 323 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 FZD5Q13467 585 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 TRADDQ15628 312 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 CNGA2Q16280 664 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 SGO2Q562F6 1265 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 XKR4Q5GH76 650 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 CFAP58Q5T655 872 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 N4BP2L1Q5TBK1 243 aaPredicted RBP17.9■□□□□ 0.46
PTPRC-206ENST00000413409 TTC27Q6P3X3 843 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 CCDC137Q6PK04 289 aaKnown RBP17.9■□□□□ 0.46
PTPRC-206ENST00000413409 LRIG3Q6UXM1 1119 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 ALKAL1Q6UXT8 129 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 PHLDB2Q86SQ0 1253 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 IQCKQ8N0W5 287 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 CLDN23Q96B33 292 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 C18orf8Q96DM3 657 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 RBM41Q96IZ5 413 aaKnown RBP17.9■□□□□ 0.46
PTPRC-206ENST00000413409 MCEEQ96PE7 176 aa17.9■□□□□ 0.46
PTPRC-206ENST00000413409 EIF2AQ9BY44 585 aaKnown RBP17.9■□□□□ 0.46
PTPRC-206ENST00000413409 MIS12Q9H081 205 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms