RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 WASP42768 502 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 DGKEP52429 567 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 MFAP3P55082 362 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 COG7P83436 770 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 GCNT1Q02742 428 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 PKDCCQ504Y2 493 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 BSPRYQ5W0U4 402 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 PM20D1Q6GTS8 502 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 DENND1BQ6P3S1 775 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 KLHDC10Q6PID8 442 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 GBP6Q6ZN66 633 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 SYT13Q7L8C5 426 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 BHLHA9Q7RTU4 235 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 WDR5BQ86VZ2 330 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 DENND1CQ8IV53 801 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 ARHGAP18Q8N392 663 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 ALLCQ8N6M5 410 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 KIAA1958Q8N8K9 716 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 TXNDC5Q8NBS9 432 aaKnown RBP10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 SLC35F5Q8WV83 523 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 P2RY11Q96G91 374 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 TPSD1Q9BZJ3 242 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 ST7Q9NRC1 585 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 SAMSN1Q9NSI8 373 aaKnown RBP10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 DNAJC17Q9NVM6 304 aaKnown RBP10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 DEC1Q9P2X7 70 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 STRIP2Q9ULQ0 834 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 F5P12259 2224 aa10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 NUP210Q8TEM1 1887 aaPredicted RBP10.67□□□□□ -0.7
NCKIPSD-202ENST00000413374 CACNA1IQ9P0X4 2223 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 CACNA1HO95180 2353 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 FAM170AA1A519 330 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 SGK1O00141 431 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 HOXC11O43248 304 aaPredicted RBP10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 THAP12O43422 761 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 PRKCSHP14314 528 aaPredicted RBP10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 PON1P27169 355 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 ZNF132P52740 706 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 DAOAP59103 153 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 SPEM2Q0P670 501 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 CCDC6Q16204 474 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 EXOC3L4Q17RC7 722 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 C10orf76Q5T2E6 689 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 TRIM65Q6PJ69 517 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 TMEM92Q6UXU6 159 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 Q6ZNB5 142 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 CLEC17AQ6ZS10 378 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 TOGARAM2Q6ZUX3 1019 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 FMNL3Q8IVF7 1028 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 SCUBE3Q8IX30 993 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 ETFBKMTQ8IXQ9 262 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 PHTF2Q8N3S3 785 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 TSTD1Q8NFU3 115 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 KCTD13Q8WZ19 329 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 ACDQ96AP0 544 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 GBP4Q96PP9 640 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 XPO6Q96QU8 1125 aaKnown RBP10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 CDK5RAP1Q96SZ6 601 aaKnown RBP10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 AJAP1Q9UKB5 411 aaPredicted RBP10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 GMEB2Q9UKD1 530 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 AGO1Q9UL18 857 aaKnown RBP10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 USP18Q9UMW8 372 aa10.66□□□□□ -0.7
NCKIPSD-202ENST00000413374 MSI1O43347 362 aaKnown RBP10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 RPP40O75818 363 aaKnown RBP10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 APBB3O95704 486 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 PNMA6AP0CW24 399 aaPredicted RBP10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 HNRNPLP14866 589 aaKnown RBP eCLIP10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 GNA15P30679 374 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 HOXA6P31267 233 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 CNR2P34972 360 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 EIF2DP41214 584 aaKnown RBP10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 TNFRSF4P43489 277 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 KIR2DL1P43626 348 aaPredicted RBP10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 MRPS21P82921 87 aaKnown RBP10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 STILQ15468 1287 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 VWA3BQ502W6 1294 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 GRAMD4Q6IC98 578 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 ANO7Q6IWH7 933 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 KBTBD6Q86V97 674 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 PGBD3Q8N328 593 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 ZNF276Q8N554 614 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 CAMKK1Q8N5S9 505 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 FAM160A2Q8N612 972 aaPredicted RBP10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 IL17RCQ8NAC3 791 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 ZNF606Q8WXB4 792 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 TUBGCP2Q9BSJ2 902 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 NDST4Q9H3R1 872 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 THAP9Q9H5L6 903 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 PARD6AQ9NPB6 346 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 CNGB3Q9NQW8 809 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 ABCC13Q9NSE7 274 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 WDR35Q9P2L0 1181 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 DACH1Q9UI36 760 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 DNAJC12Q9UKB3 198 aa10.65□□□□□ -0.7
NCKIPSD-202ENST00000413374 PTPRDP23468 1912 aa10.64□□□□□ -0.71
NCKIPSD-202ENST00000413374 MIA3Q5JRA6 1907 aa10.64□□□□□ -0.71
NCKIPSD-202ENST00000413374 OBSL1O75147 1896 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms