RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CREB3L4Q8TEY5 395 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 NSUN4Q96CB9 384 aaKnown RBP4.98□□□□□ -1.61
BRCA1-204ENST00000412061 LOXL4Q96JB6 756 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 WWC2-AS2Q96NR7 200 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 REEP2Q9BRK0 252 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 ADPGKQ9BRR6 497 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 BDH2Q9BUT1 245 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 TWSG1Q9GZX9 223 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 ABHD16BQ9H3Z7 469 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 EPS8L2Q9H6S3 715 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 XPNPEP3Q9NQH7 507 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 ARGLU1Q9NWB6 273 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-204ENST00000412061 AURKAIP1Q9NWT8 199 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-204ENST00000412061 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-204ENST00000412061 PCDHGB4Q9UN71 923 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 RRP7AQ9Y3A4 280 aaKnown RBP4.98□□□□□ -1.61
BRCA1-204ENST00000412061 FPGT-TNNI3KV9GXZ4 949 aa4.98□□□□□ -1.61
BRCA1-204ENST00000412061 CCDC78A2IDD5 438 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 GRXCR1A8MXD5 290 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 E7EVH7 732 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 RAB27BO00194 218 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 SUN1O94901 812 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ADRB2P07550 413 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ACADMP11310 421 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 PECAM1P16284 738 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ITGALP20701 1170 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 HOXA5P20719 270 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 MUTP22033 750 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ACRV1P26436 265 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 LRPAP1P30533 357 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 CPT1AP50416 773 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 CCT4P50991 539 aaKnown RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ANXA11P50995 505 aaKnown RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 LILRA4P59901 499 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 CALD1Q05682 793 aaKnown RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 GALNT2Q10471 571 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 PPP2R5CQ13362 524 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ARHGEF7Q14155 803 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 NFIXQ14938 502 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 PRKD1Q15139 912 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 CTXN3Q4LDR2 81 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 RABL3Q5HYI8 236 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 SLC10A5Q5PT55 438 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ERICH6BQ5W0A0 696 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 RPUSD3Q6P087 351 aaKnown RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 FAM47EQ6ZV65 393 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 KRT74Q7RTS7 529 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 GALNTL5Q7Z4T8 443 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 CHST13Q8NET6 341 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 CPT1CQ8TCG5 803 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ZNF483Q8TF39 744 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 C3orf49Q96BT1 292 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 LRIG1Q96JA1 1093 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 MXD3Q9BW11 206 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 PDCL3Q9H2J4 239 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ATP8A2Q9NTI2 1148 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 VSX1Q9NZR4 365 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 KCNE5Q9UJ90 142 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 RUSC2Q8N2Y8 1516 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 A0A0G2JLL6 359 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 PRAMEF33A0A0G2JMD5 474 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 A0A1W2PS29 197 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 GAGE12BA1L429 117 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 GAGE12HA6NDE8 117 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 TRIM64A6NGJ6 449 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 TRIM64BA6NI03 449 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 AHRRA9YTQ3 701 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 RNASET2O00584 256 aaKnown RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 KIAA0355O15063 1070 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 PRAMEF10O60809 474 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 CFIP05156 583 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ELANEP08246 267 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 CNPP09543 421 aaKnown RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 TPH1P17752 444 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ATICP31939 592 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 MLH1P40692 756 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 PXNP49023 591 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ZNF134P52741 427 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ALDH18A1P54886 795 aaKnown RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 WASHC5Q12768 1159 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 RASA2Q15283 850 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ANKRD1Q15327 319 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 BAK1Q16611 211 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 TRIM71Q2Q1W2 868 aaKnown RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 SPDYE7PQ495Y7 208 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 PREPLQ4J6C6 727 aaPredicted RBP4.97□□□□□ -1.61
BRCA1-204ENST00000412061 USP17L6PQ6QN14 398 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 SLC22A25Q6T423 547 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 LRRC55Q6ZSA7 311 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 ANKS1BQ7Z6G8 1248 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 TMPRSS6Q8IU80 811 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 CCDC28AQ8IWP9 274 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 TMEM132CQ8N3T6 1108 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 TTC9BQ8N6N2 239 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 Q8NA96 180 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 TBC1D22AQ8WUA7 517 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 CUL5Q93034 780 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 SPATA17Q96L03 361 aa4.97□□□□□ -1.61
BRCA1-204ENST00000412061 SLC46A2Q9BY10 475 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms