RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 KLKB1P03952 638 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 AOC1P19801 751 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 COL9A1P20849 921 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 GJA4P35212 333 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 RPL34P49207 117 aaKnown RBP12.53□□□□□ -0.4
NEDD1-202ENST00000411739 PDGFRLQ15198 375 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 SYPL2Q5VXT5 272 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 OR6B2Q6IFH4 312 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 TMEM110Q86TL2 294 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 FMNL3Q8IVF7 1028 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 PJA1Q8NG27 643 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 LHX5Q9H2C1 402 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 COL4A2P08572 1712 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 ANTXRLA6NF34 631 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 STC2O76061 302 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 CAVIN2O95810 425 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 NCAM1P13591 858 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 TCF3P15923 654 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 NAA35Q5VZE5 725 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 RHBDF2Q6PJF5 856 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 TPGS1Q6ZTW0 290 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 FAM183BPQ6ZVS7 135 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 CCDC105Q8IYK2 499 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 NAT16Q8N8M0 369 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 SLC30A5Q8TAD4 765 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 CPLX3Q8WVH0 158 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 BAP1Q92560 729 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 PCDHB18PQ96TA0 734 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 SYNCQ9H7C4 482 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 ABCC13Q9NSE7 274 aa12.53□□□□□ -0.4
NEDD1-202ENST00000411739 E2F8A0AVK6 867 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 LRRC53A6NM62 1247 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 FBXO21O94952 628 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 CYP17A1P05093 508 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 ACADSBP45954 432 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 SLC6A11P48066 632 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 CLCN5P51795 746 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 PITX1P78337 314 aaPredicted RBP12.52□□□□□ -0.4
NEDD1-202ENST00000411739 FMO1Q01740 532 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 FZD5Q13467 585 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 DHCR24Q15392 516 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 LY6G5CQ5SRR4 150 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 DDX42Q86XP3 938 aaKnown RBP eCLIP12.52□□□□□ -0.4
NEDD1-202ENST00000411739 TMEM25Q86YD3 366 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 CPA6Q8N4T0 437 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 STK32AQ8WU08 396 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 ATP2A3Q93084 1043 aa12.52□□□□□ -0.4
NEDD1-202ENST00000411739 XPO4Q9C0E2 1151 aaKnown RBP12.52□□□□□ -0.4
NEDD1-202ENST00000411739 SEPT11Q9NVA2 429 aaKnown RBP12.52□□□□□ -0.4
NEDD1-202ENST00000411739 TRDMT1O14717 391 aaKnown RBP12.52□□□□□ -0.41
NEDD1-202ENST00000411739 GALK1P51570 392 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 RNASE9P60153 205 aaKnown RBP12.52□□□□□ -0.41
NEDD1-202ENST00000411739 CDR2Q01850 454 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 MESP2Q0VG99 397 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 E4F1Q66K89 784 aaPredicted RBP12.52□□□□□ -0.41
NEDD1-202ENST00000411739 KLHDC10Q6PID8 442 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 TADA2BQ86TJ2 420 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 C12orf40Q86WS4 652 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 DENND1CQ8IV53 801 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 TMEM35BQ8NCS4 154 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 IRGQQ8WZA9 623 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 GOLGA1Q92805 767 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 P2RY11Q96G91 374 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 C8orf33Q9H7E9 229 aaPredicted RBP12.52□□□□□ -0.41
NEDD1-202ENST00000411739 LMAN1LQ9HAT1 526 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 STRIP2Q9ULQ0 834 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 CEP83Q9Y592 693 aa12.52□□□□□ -0.41
NEDD1-202ENST00000411739 SYNJ2BP-COX16A0A087WUM0 186 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 MAN2B1O00754 1011 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 CORO1AP31146 461 aaKnown RBP12.51□□□□□ -0.41
NEDD1-202ENST00000411739 MEA1Q16626 185 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 ANO4Q32M45 955 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 HTR3DQ70Z44 454 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 RALGPS2Q86X27 583 aaPredicted RBP12.51□□□□□ -0.41
NEDD1-202ENST00000411739 DNAAF5Q86Y56 855 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 SFTPA1Q8IWL2 248 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 ZNF687Q8N1G0 1237 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 SCML4Q8N228 414 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 PLK2Q9NYY3 685 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 COX16Q9P0S2 106 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 ATG2BQ96BY7 2078 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 ZNF318Q5VUA4 2279 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 A0A1W2PQC6 194 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 GOLGA8SH3BPF8 625 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 CAPN9O14815 690 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 TRIM24O15164 1050 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 NFATC1O95644 943 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 SKILP12757 684 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 ZNF445P59923 1031 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 COG7P83436 770 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 GOLGA8FQ08AF8 430 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 GOLGA8DPQ0D2H9 430 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 GAB4Q2WGN9 574 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 Q6ZS52 159 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 ERICH1Q86X53 443 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 DQX1Q8TE96 717 aaKnown RBP12.51□□□□□ -0.41
NEDD1-202ENST00000411739 NOX5Q96PH1 765 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 CDK5RAP1Q96SZ6 601 aaKnown RBP12.51□□□□□ -0.41
NEDD1-202ENST00000411739 DLGAP2Q9P1A6 1054 aa12.51□□□□□ -0.41
NEDD1-202ENST00000411739 LSM7Q9UK45 103 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms