RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PLCL2Q9UPR0 1127 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 TLR6Q9Y2C9 796 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 PCDHB14Q9Y5E9 798 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 NR2E3Q9Y5X4 410 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 MUC4Q99102 2169 aa-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 DYNC1H1Q14204 4646 aaKnown RBP-1.23□□□□□ -2.61
RNU4-88P-201ENST00000411220 PKD1P98161 4303 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 A0A0C4DFX4 3053 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 VPS13DQ5THJ4 4388 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 PI4KAP42356 2102 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 MEGF6O75095 1541 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 CEP295Q9C0D2 2601 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 IGKV1OR2-108A0A075B7D4 117 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 RPS10-NUDT3A0A1W2PQS6 291 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 PRAMEF25A6NGN4 478 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 A8MZ25 164 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 PANO1I0J062 215 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 OVOL1O14753 267 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 GPR182O15218 404 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 DCXO43602 365 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 C1QCP02747 245 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 IGKV1-16P04430 117 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 IGKV5-2P06315 115 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 LCP1P13796 627 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 PAX1P15863 534 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 GCSHP23434 173 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 GATA3P23771 443 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 HNRNPH1P31943 449 aaKnown RBP-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 MASP1P48740 699 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 ATP2B2Q01814 1243 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 APBA1Q02410 837 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 BMPR2Q13873 1038 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 KLK9Q2XQG4 91 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 GNPTABQ3T906 1256 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 SLC9C1Q4G0N8 1177 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 C2orf83Q53S99 150 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 NOMO2Q5JPE7 1267 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 DCAF10Q5QP82 559 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 ALS2CLQ60I27 953 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF793Q6ZN11 406 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 USP53Q70EK8 1073 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 TRAPPC11Q7Z392 1133 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 ATG9AQ7Z3C6 839 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 ADAT2Q7Z6V5 191 aaKnown RBP-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 AMIGO1Q86WK6 493 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 PTOV1Q86YD1 416 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 NAGSQ8N159 534 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 GPR156Q8NFN8 814 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 CHTF18Q8WVB6 975 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZDHHC19Q8WVZ1 309 aaPredicted RBP-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 TMEM125Q96AQ2 219 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF653Q96CK0 615 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 RCC1LQ96I51 464 aaKnown RBP-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 RSRP1Q9BUV0 290 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 OSBPL7Q9BZF2 842 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 ERVMER34-1Q9H9K5 563 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 SH2D2AQ9NP31 389 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 ESM1Q9NQ30 184 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZDHHC18Q9NUE0 388 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 EXD2Q9NVH0 621 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 GPRC5DQ9NZD1 345 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 B4GALT7Q9UBV7 327 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 DNM3Q9UQ16 869 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 PKD1L2Q7Z442 2459 aa-1.24□□□□□ -2.61
RNU4-88P-201ENST00000411220 TDRD15B5MCY1 1934 aaKnown RBP-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 MTCL1Q9Y4B5 1905 aaKnown RBP-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 DNAH1Q9P2D7 4330 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 ANK2Q01484 3957 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 CADP27708 2225 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 A0A087WZY1 265 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 IGKV1-9A0A0C4DH69 117 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 H0YGN5 161 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 BCL2L11O43521 198 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 C22orf31O95567 290 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 CRYAAP02489 173 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 LYNX1P0DP58 116 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 RPL34P49207 117 aaKnown RBP-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 DNM2P50570 870 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 LOXL3P58215 753 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 SF3B2Q13435 895 aaKnown RBP-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 TDGQ13569 410 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 MPP2Q14168 576 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 E2F2Q14209 437 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 TESK1Q15569 626 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 TPRXLQ17RH7 258 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 Q5W150 140 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF589Q86UQ0 364 aaPredicted RBP-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 GAS2L3Q86XJ1 694 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 SLC30A7Q8NEW0 376 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 PDCD6IPQ8WUM4 868 aaKnown RBP-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 JPH3Q8WXH2 748 aaPredicted RBP-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 STARD4Q96DR4 205 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 SGF29Q96ES7 293 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 IFT74Q96LB3 600 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 ARID3AQ99856 593 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF649Q9BS31 505 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 PI4K2AQ9BTU6 479 aa-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 ZNF334Q9HCZ1 680 aaPredicted RBP-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 BIN2Q9UBW5 565 aaPredicted RBP-1.25□□□□□ -2.61
RNU4-88P-201ENST00000411220 LIMCH1Q9UPQ0 1083 aa-1.25□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms