RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 ZNF280DQ6N043 979 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 C1orf228Q6PIY5 440 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 LRSAM1Q6UWE0 723 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 PIK3AP1Q6ZUJ8 805 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 RELL1Q8IUW5 271 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 YAF2Q8IY57 180 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 SLFN12Q8IYM2 578 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 FAM177A1Q8N128 213 aaPredicted RBP4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 ELMOD1Q8N336 334 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 LEMD2Q8NC56 503 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 FAM13CQ8NE31 585 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 WASF1Q92558 559 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 CCDC120Q96HB5 630 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 ZC3H10Q96K80 434 aaKnown RBP4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 CCDC43Q96MW1 224 aaKnown RBP4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 PGLYRP2Q96PD5 576 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 ALPK1Q96QP1 1244 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 HSD17B14Q9BPX1 270 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 ADPGKQ9BRR6 497 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 POLR3CQ9BUI4 534 aaPredicted RBP4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 TM6SF1Q9BZW5 370 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 GZF1Q9H116 711 aaPredicted RBP4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 DUSP15Q9H1R2 295 aaPredicted RBP4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 CDT1Q9H211 546 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 FAM53CQ9NYF3 392 aa4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 AFF4Q9UHB7 1163 aaKnown RBP4.88□□□□□ -1.63
RNU4-25P-201ENST00000410569 ITPR1Q14643 2758 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 ABCA7Q8IZY2 2146 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 SMIM28A0A1B0GU29 152 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 BCLAF3A2AJT9 711 aaKnown RBP4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 OTOL1A6NHN0 477 aaPredicted RBP4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 PATE3B3GLJ2 98 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 H7C4K7 107 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 ACKR2O00590 384 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 CDX4O14627 284 aaPredicted RBP4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 TRAPPC3O43617 180 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 MED24O75448 989 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 SOAT2O75908 522 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 CAVIN2O95810 425 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 EGFP01133 1207 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 GLI1P08151 1106 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 MCM4P33991 863 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 YARSP54577 528 aaKnown RBP4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 OSTNP61366 133 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 CYP4F8P98187 520 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 CREB5Q02930 508 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 STK3Q13188 491 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 ELF2Q15723 593 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 GAB4Q2WGN9 574 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 ZNF568Q3ZCX4 644 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 ARHGAP29Q52LW3 1261 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 TMEM196Q5HYL7 178 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 GPR158Q5T848 1215 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 ATF7IP2Q5U623 682 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 TRIM68Q6AZZ1 485 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 ALKAL1Q6UXT8 129 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 GAREM2Q75VX8 874 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 RUFY3Q7L099 469 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 ARID3BQ8IVW6 561 aaPredicted RBP4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 SYNPOQ8N3V7 929 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 MCPH1Q8NEM0 835 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 DEFB124Q8NES8 71 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 BEST2Q8NFU1 509 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 DEPTORQ8TB45 409 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 BPIFB1Q8TDL5 484 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 E2F7Q96AV8 911 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 C18orf25Q96B23 403 aaPredicted RBP4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 KIRREL1Q96J84 757 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 ZNF512Q96ME7 567 aaPredicted RBP4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 TMEM209Q96SK2 561 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 C2orf40Q9H1Z8 148 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 TTC12Q9H892 705 aaPredicted RBP4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 BRMS1Q9HCU9 246 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 HPS4Q9NQG7 708 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 REV1Q9UBZ9 1251 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 TUBGCP4Q9UGJ1 667 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 KLK13Q9UKR3 277 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 POLR3KQ9Y2Y1 108 aaPredicted RBP4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 PHLPP2Q6ZVD8 1323 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 STK36Q9NRP7 1315 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 PLXNB3Q9ULL4 1909 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 PTPRBP23467 1997 aa4.87□□□□□ -1.63
RNU4-25P-201ENST00000410569 SCN1AP35498 2009 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 MTMR11A4FU01 709 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 LRRC10BA6NIK2 292 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 WASH4PA8MWX3 477 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 ABLIM1O14639 778 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 MARCH6O60337 910 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 NEMFO60524 1076 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 BAG4O95429 457 aaKnown RBP4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 HARSP12081 509 aaKnown RBP4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 CEACAM1P13688 526 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 ARSAP15289 507 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 KCNE1P15382 129 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 ATF6P18850 670 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 ATP2B1P20020 1258 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 CSRP1P21291 193 aaKnown RBP4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 BCKDHBP21953 392 aa4.86□□□□□ -1.63
RNU4-25P-201ENST00000410569 U2AF2P26368 475 aaKnown RBP eCLIP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms