RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 E9PCH4 1651 aa11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 KPNA3O00505 521 aaPredicted RBP11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 TFE3P19532 575 aaPredicted RBP11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 GAS2L1Q99501 681 aaPredicted RBP11.56□□□□□ -0.56
PRPF40A-202ENST00000410080 ERI2A8K979 691 aaKnown RBP11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 OR10H2O60403 315 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 LTFP02788 710 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 OR1E1P30953 314 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 KLK7P49862 253 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 ZNF543Q08ER8 600 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 INSCQ1MX18 579 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 PTAR1Q7Z6K3 402 aaPredicted RBP11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 UNKQ9C0B0 810 aaKnown RBP11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 PHF2O75151 1096 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 SMNDC1O75940 238 aaKnown RBP eCLIP11.55□□□□□ -0.561e-6■■■■□ 26.7
PRPF40A-202ENST00000410080 RANBP1P43487 201 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 ZSWIM7Q19AV6 140 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 TRAPPC5Q8IUR0 188 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 SIKE1Q9BRV8 207 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 SERPINB1P30740 379 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 GRIK3Q13003 919 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 FMR1NBQ8N0W7 255 aaPredicted RBP11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 TSPAN14Q8NG11 270 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 GRIN3AQ8TCU5 1115 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 NEK7Q8TDX7 302 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 CRAMP1Q96RY5 1269 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 TBCDQ9BTW9 1192 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 CDY2AQ9Y6F7 541 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 CDY1Q9Y6F8 540 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 SPATA31A1Q5TZJ5 1347 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 MYH2Q9UKX2 1941 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 PVALEFA0A1B0GWK0 134 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 RBMXL2O75526 392 aaKnown RBP11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 CYP2A7P20853 494 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 HNMTP50135 292 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 SERPINB9P50453 376 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 STAT4Q14765 748 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 RNFT2Q96EX2 444 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 CGRRF1Q99675 332 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 SKP1P63208 163 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 VPS72Q15906 364 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 SYDE1Q6ZW31 735 aaPredicted RBP11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 PARGQ86W56 976 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 CHST13Q8NET6 341 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 KLHL31Q9H511 634 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 NEDD1Q8NHV4 660 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 VTA1Q9NP79 307 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 LRRC4BQ9NT99 713 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 USP18Q9UMW8 372 aa11.55□□□□□ -0.56
PRPF40A-202ENST00000410080 TTC26A0AVF1 554 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM187AA6NFU0 413 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 OR6B1O95007 311 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 MAPK1P28482 360 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 TALDO1P37837 337 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 ATP6AP1LQ52LC2 224 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 FBXL19Q6PCT2 694 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 CACTIN-AS1Q8N1I8 211 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 UTP15Q8TED0 518 aaKnown RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 SLC4A9Q96Q91 983 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 CNPPD1Q9BV87 410 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 ROGDIQ9GZN7 287 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 CTNNB1P35222 781 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 ARMC4Q5T2S8 1044 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 SEMA4DQ92854 862 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 TARS2Q9BW92 718 aaKnown RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 FANCEQ9HB96 536 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 AASDHPPTQ9NRN7 309 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 ZMYM5Q9UJ78 669 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM50BQ9Y247 325 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 CSDE1O75534 798 aaKnown RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 CAMTA2O94983 1202 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 PTPN3P26045 913 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 CTCFP49711 727 aaPredicted RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 RSAD1Q9HA92 442 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 TMEM8AQ9HCN3 771 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 TIMM13Q9Y5L4 95 aaPredicted RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 USP27XA6NNY8 438 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 ITGA3P26006 1051 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 PKN2Q16513 984 aaKnown RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 STOX1Q6ZVD7 989 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 NECAB2Q7Z6G3 386 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 ATG16L2Q8NAA4 619 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 SYTL5Q8TDW5 730 aaPredicted RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 DNAJB3Q8WWF6 145 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 RERGQ96A58 199 aaPredicted RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 SH3GL2Q99962 352 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 CST8O60676 142 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 GLP2RO95838 553 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 VAV1P15498 845 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 ZNF23P17027 643 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 KLRK1P26718 216 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 EFL1Q7Z2Z2 1120 aaKnown RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 TMEM159Q96B96 161 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 NARS2Q96I59 477 aaKnown RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 ELOVL6Q9H5J4 265 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 ZNF609O15014 1411 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 C1DQ13901 141 aaKnown RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 FAM171BQ6P995 826 aa11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 MARK2Q7KZI7 788 aaKnown RBP11.54□□□□□ -0.56
PRPF40A-202ENST00000410080 GLT6D1Q7Z4J2 308 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms