RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 C1orf122Q6ZSJ8 110 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 SPPL3Q8TCT6 385 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 PROKR1Q8TCW9 393 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 RSPRY1Q96DX4 576 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 WDYHV1Q96HA8 205 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 FBXL20Q96IG2 436 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 AIFM2Q9BRQ8 373 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 SAYSD1Q9NPB0 183 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 TRIM36Q9NQ86 728 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 KLC4Q9NSK0 619 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 KIF17Q9P2E2 1029 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 STEAP1Q9UHE8 339 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 DAPP1Q9UN19 280 aa5.85□□□□□ -1.47
LSM5-206ENST00000409987 FIBPO43427 364 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 RPP40O75818 363 aaKnown RBP5.84□□□□□ -1.47
LSM5-206ENST00000409987 PCSK6P29122 969 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 CUL4BQ13620 913 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 CYP1B1Q16678 543 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 TXNRD1Q16881 649 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 SPATS1Q496A3 300 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 TMEM196Q5HYL7 178 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 MIIPQ5JXC2 388 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 ATPAF1Q5TC12 328 aaPredicted RBP5.84□□□□□ -1.47
LSM5-206ENST00000409987 MSANTD2Q6P1R3 559 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 FTSJ3Q8IY81 847 aaKnown RBP5.84□□□□□ -1.47
LSM5-206ENST00000409987 RFKQ969G6 155 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 ZSCAN31Q96LW9 406 aaPredicted RBP5.84□□□□□ -1.47
LSM5-206ENST00000409987 ALG8Q9BVK2 526 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 EHD3Q9NZN3 535 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 FEM1BQ9UK73 627 aa5.84□□□□□ -1.47
LSM5-206ENST00000409987 ITIH6Q6UXX5 1313 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 H0Y3Z8 333 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 SPRY2O43597 315 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 PEX1O43933 1283 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 PPP6R2O75170 966 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 CER1O95813 267 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 CD19P15391 556 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 MCCP23508 829 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 ZEB1P37275 1124 aaPredicted RBP5.83□□□□□ -1.48
LSM5-206ENST00000409987 FOLR3P41439 243 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 EIF4A1P60842 406 aaKnown RBP5.83□□□□□ -1.48
LSM5-206ENST00000409987 CSHL1Q14406 222 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 FBXO47Q5MNV8 452 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 LY6G5CQ5SRR4 150 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 TTC22Q5TAA0 569 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 KIAA0895LQ68EN5 471 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 GRHL2Q6ISB3 625 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 NFRKBQ6P4R8 1299 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 PIK3AP1Q6ZUJ8 805 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 RRAGAQ7L523 313 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 RAB11FIP2Q7L804 512 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 SPRED1Q7Z699 444 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 HERC6Q8IVU3 1022 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 SH3RF3Q8TEJ3 882 aaPredicted RBP5.83□□□□□ -1.48
LSM5-206ENST00000409987 WDR60Q8WVS4 1066 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 XAGE5Q8WWM1 108 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 THAP4Q8WY91 577 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 TFAP2BQ92481 460 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 CTHRC1Q96CG8 243 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 MCRS1Q96EZ8 462 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 PBKQ96KB5 322 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 TRAPPC9Q96Q05 1148 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 VPS16Q9H269 839 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 UNC45AQ9H3U1 944 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 NKX1-2Q9UD57 310 aaPredicted RBP5.83□□□□□ -1.48
LSM5-206ENST00000409987 GABRQQ9UN88 632 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 CNTN6Q9UQ52 1028 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 SH2B3Q9UQQ2 575 aa5.83□□□□□ -1.48
LSM5-206ENST00000409987 PSMD9O00233 223 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 KIAA0355O15063 1070 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 MPPED1O15442 326 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 PMPCBO75439 489 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 MBD4O95243 580 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 ONECUT2O95948 504 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 PYGLP06737 847 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 TMEM225BP0DP42 221 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 CKMT1AP12532 417 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 DRD1P21728 446 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 GKP32189 559 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 MCM5P33992 734 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 G3BP1Q13283 466 aaKnown RBP eCLIP5.82□□□□□ -1.48
LSM5-206ENST00000409987 BMPR2Q13873 1038 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 CCDC96Q2M329 555 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 ADCK5Q3MIX3 580 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 AASDHQ4L235 1098 aaPredicted RBP5.82□□□□□ -1.48
LSM5-206ENST00000409987 FAM90A2PQ658T7 463 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 FAM180BQ6P0A1 224 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 Q6ZNX1 250 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 TRABD2AQ86V40 505 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 TTC30AQ86WT1 665 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 RAB11FIP4Q86YS3 637 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 CSGALNACT1Q8TDX6 532 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 PRR25Q96S07 402 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 OSBPL5Q9H0X9 879 aaPredicted RBP5.82□□□□□ -1.48
LSM5-206ENST00000409987 TAF1DQ9H5J8 278 aaPredicted RBP5.82□□□□□ -1.48
LSM5-206ENST00000409987 ELAC1Q9H777 363 aaKnown RBP5.82□□□□□ -1.48
LSM5-206ENST00000409987 SLC45A1Q9Y2W3 748 aa5.82□□□□□ -1.48
LSM5-206ENST00000409987 REXO2Q9Y3B8 237 aaKnown RBP5.82□□□□□ -1.48
LSM5-206ENST00000409987 GXYLT2A0PJZ3 443 aa5.81□□□□□ -1.48
LSM5-206ENST00000409987 RRN3P2A6NIE6 340 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms