RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 SKA1Q96BD8 255 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 SIPA1Q96FS4 1042 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 TCTN2Q96GX1 697 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 SLC6A18Q96N87 628 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 ABCG4Q9H172 646 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 GDF3Q9NR23 364 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 GCNT4Q9P109 453 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 DEC1Q9P2X7 70 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 ENTPD4Q9Y227 616 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 USP20Q9Y2K6 914 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 ENTPD2Q9Y5L3 495 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 CSPG4Q6UVK1 2322 aa7.52□□□□□ -1.21
UBE2F-204ENST00000409953 LRRIQ4A6NIV6 560 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 TRIM38O00635 465 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 ANP32CO43423 234 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 TSPAN3O60637 253 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 PSMD10O75832 226 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 WNT1P04628 370 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 HAPLN1P10915 354 aaPredicted RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 LIPCP11150 499 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 RARGP13631 454 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 RXRAP19793 462 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 CIITAP33076 1130 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 ACSL1P33121 698 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 QARSP47897 775 aaKnown RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 RACK1P63244 317 aaKnown RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 GAD2Q05329 585 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 DCAF4L1Q3SXM0 396 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 LACTB2Q53H82 288 aaPredicted RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 XKR9Q5GH70 373 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 LY6G5CQ5SRR4 150 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 ATF7IP2Q5U623 682 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 BTBD8Q5XKL5 378 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 OVOS1Q6IE37 1185 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 TMPRSS6Q8IU80 811 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 OR10T2Q8NGX3 314 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 SPATA3Q8NHX4 192 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 WDR36Q8NI36 951 aaKnown RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 PRCCQ92733 491 aaPredicted RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 HEXIM2Q96MH2 286 aaKnown RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 ZMAT2Q96NC0 199 aaKnown RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 ORAI3Q9BRQ5 295 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 GLT8D2Q9H1C3 349 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 RPF1Q9H9Y2 349 aaKnown RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 SEPT10Q9P0V9 454 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 WRAP73Q9P2S5 460 aaPredicted RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 UXTQ9UBK9 157 aaPredicted RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 ERRFI1Q9UJM3 462 aaPredicted RBP7.51□□□□□ -1.21
UBE2F-204ENST00000409953 KIF26BQ2KJY2 2108 aa7.51□□□□□ -1.21
UBE2F-204ENST00000409953 PRR19A6NJB7 356 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 GFRA2O00451 464 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 SDC3O75056 442 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 CSH1P0DML2 217 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 CSH2P0DML3 217 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 HDCP19113 662 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 SLC6A4P31645 630 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 YWHABP31946 246 aaKnown RBP7.5□□□□□ -1.21
UBE2F-204ENST00000409953 GPR15P49685 360 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 YARSP54577 528 aaKnown RBP7.5□□□□□ -1.21
UBE2F-204ENST00000409953 BCAT1P54687 386 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 WNT7BP56706 349 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 TRDNQ13061 729 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 ZNF211Q13398 564 aaPredicted RBP7.5□□□□□ -1.21
UBE2F-204ENST00000409953 PRPF4BQ13523 1007 aaKnown RBP7.5□□□□□ -1.21
UBE2F-204ENST00000409953 FAM187BQ17R55 369 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 EIF2S3LQ2VIR3 472 aaKnown RBP7.5□□□□□ -1.21
UBE2F-204ENST00000409953 XKR4Q5GH76 650 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 SDHAF4Q5VUM1 108 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 GRAMD4Q6IC98 578 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 B3GNT9Q6UX72 402 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 TAOK1Q7L7X3 1001 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 TMC6Q7Z403 805 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 JAMLQ86YT9 394 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 MAPK15Q8TD08 544 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 SCFD1Q8WVM8 642 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 GRAMD1AQ96CP6 724 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 TOPORSQ9NS56 1045 aaPredicted RBP7.5□□□□□ -1.21
UBE2F-204ENST00000409953 ABI2Q9NYB9 513 aaPredicted RBP7.5□□□□□ -1.21
UBE2F-204ENST00000409953 PCDHGA7Q9Y5G6 932 aa7.5□□□□□ -1.21
UBE2F-204ENST00000409953 ARHGEF17Q96PE2 2063 aaPredicted RBP7.49□□□□□ -1.21
UBE2F-204ENST00000409953 PRRT4C9JH25 899 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 DKC1O60832 514 aaKnown RBP eCLIP7.49□□□□□ -1.21
UBE2F-204ENST00000409953 CD2BP2O95400 341 aaKnown RBP7.49□□□□□ -1.21
UBE2F-204ENST00000409953 SEMA4FO95754 770 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 C4BPAP04003 597 aaKnown RBP7.49□□□□□ -1.21
UBE2F-204ENST00000409953 P4HBP07237 508 aaKnown RBP7.49□□□□□ -1.21
UBE2F-204ENST00000409953 GP1BAP07359 652 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 MX1P20591 662 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 ARL2P36404 184 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 PTK2Q05397 1052 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 SMTNL2Q2TAL5 461 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 HS1BP3Q53T59 392 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 ALKAL1Q6UXT8 129 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 LIAT1Q6ZQX7 453 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 CEP120Q8N960 986 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 ZNF511Q8NB15 262 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 EXOC6Q8TAG9 804 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 CPT1CQ8TCG5 803 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 SPPL2BQ8TCT7 592 aa7.49□□□□□ -1.21
UBE2F-204ENST00000409953 ARRDC3Q96B67 414 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms