RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SLC35F5Q8WV83 523 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 KCTD13Q8WZ19 329 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 P2RY11Q96G91 374 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 CDK5RAP1Q96SZ6 601 aaKnown RBP18.58■□□□□ 0.56
LSM5-204ENST00000409909 CRACR2AQ9BSW2 395 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 LRRC4Q9HBW1 653 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 RASAL2Q9UJF2 1139 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 LSM7Q9UK45 103 aaKnown RBP18.58■□□□□ 0.56
LSM5-204ENST00000409909 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.58■□□□□ 0.56
LSM5-204ENST00000409909 CNTN6Q9UQ52 1028 aa18.58■□□□□ 0.56
LSM5-204ENST00000409909 EML5Q05BV3 1969 aa18.57■□□□□ 0.56
LSM5-204ENST00000409909 CCDC163A0A0D9SF12 145 aa18.57■□□□□ 0.56
LSM5-204ENST00000409909 APODP05090 189 aa18.57■□□□□ 0.56
LSM5-204ENST00000409909 HMBSP08397 361 aa18.57■□□□□ 0.56
LSM5-204ENST00000409909 SETSIPP0DME0 302 aa18.57■□□□□ 0.56
LSM5-204ENST00000409909 KIR2DL1P43626 348 aaPredicted RBP18.57■□□□□ 0.56
LSM5-204ENST00000409909 DPCR1Q3MIW9 517 aa18.57■□□□□ 0.56
LSM5-204ENST00000409909 BTBD8Q5XKL5 378 aa18.57■□□□□ 0.56
LSM5-204ENST00000409909 PMF1Q6P1K2 205 aa18.57■□□□□ 0.56
LSM5-204ENST00000409909 CCDC33Q8N5R6 958 aa18.57■□□□□ 0.56
LSM5-204ENST00000409909 CCDC26Q8TAB7 109 aa18.57■□□□□ 0.56
LSM5-204ENST00000409909 SECISBP2LQ93073 1101 aaKnown RBP18.57■□□□□ 0.56
LSM5-204ENST00000409909 ACDQ96AP0 544 aa18.57■□□□□ 0.56
LSM5-204ENST00000409909 UBE2TQ9NPD8 197 aaPredicted RBP18.57■□□□□ 0.56
LSM5-204ENST00000409909 MYO18AQ92614 2054 aaKnown RBP18.56■□□□□ 0.56
LSM5-204ENST00000409909 YJEFN3A6XGL0 299 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.56■□□□□ 0.56
LSM5-204ENST00000409909 E7ENQ6 273 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 SLC9A1P19634 815 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 TGM1P22735 817 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 TNFRSF4P43489 277 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 RGS7P49802 495 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 MRPS21P82921 87 aaKnown RBP18.56■□□□□ 0.56
LSM5-204ENST00000409909 COG7P83436 770 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 APBA1Q02410 837 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 LAIR1Q6GTX8 287 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 GJB7Q6PEY0 223 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 TPGS1Q6ZTW0 290 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 RSRC2Q7L4I2 434 aaKnown RBP18.56■□□□□ 0.56
LSM5-204ENST00000409909 ALLCQ8N6M5 410 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 IL17RCQ8NAC3 791 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 IPO9Q96P70 1041 aaKnown RBP18.56■□□□□ 0.56
LSM5-204ENST00000409909 NUP62CLQ9H1M0 184 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 ZDHHC4Q9NPG8 344 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 MARK1Q9P0L2 795 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 MARCH2Q9P0N8 246 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 DEC1Q9P2X7 70 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 RAB23Q9ULC3 237 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 MMP17Q9ULZ9 603 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 LAMA1P25391 3075 aa18.56■□□□□ 0.56
LSM5-204ENST00000409909 NEDD8-MDP1E9PL57 170 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 M0QYV0 167 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 PIK3R2O00459 728 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 KLF8O95600 359 aaPredicted RBP18.55■□□□□ 0.56
LSM5-204ENST00000409909 APBB3O95704 486 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 LCP1P13796 627 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 TYRP14679 529 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 HNRNPLP14866 589 aaKnown RBP eCLIP18.55■□□□□ 0.56
LSM5-204ENST00000409909 TIE1P35590 1138 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 BSPRYQ5W0U4 402 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 TRIM65Q6PJ69 517 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 TMEM92Q6UXU6 159 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 SIX6OS1Q8N1H7 587 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 SCML4Q8N228 414 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 GAB3Q8WWW8 586 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 EDEM1Q92611 657 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 BBS2Q9BXC9 721 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 PARD6AQ9NPB6 346 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 CNGB3Q9NQW8 809 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 WDR35Q9P2L0 1181 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 EBF1Q9UH73 591 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 HCN2Q9UL51 889 aa18.55■□□□□ 0.56
LSM5-204ENST00000409909 SPAG17Q6Q759 2223 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 SLC12A8A0AV02 714 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 TBC1D3BA6NDS4 549 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 SGK1O00141 431 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 AXIN1O15169 862 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 CACNG3O60359 315 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 RPP40O75818 363 aaKnown RBP18.54■□□□□ 0.56
LSM5-204ENST00000409909 KRT5P13647 590 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 CORO1AP31146 461 aaKnown RBP18.54■□□□□ 0.56
LSM5-204ENST00000409909 DAOAP59103 153 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 STILQ15468 1287 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 CRY1Q16526 586 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 CEP68Q76N32 757 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 FAM160A2Q8N612 972 aaPredicted RBP18.54■□□□□ 0.56
LSM5-204ENST00000409909 TERB1Q8NA31 727 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 TXNDC5Q8NBS9 432 aaKnown RBP18.54■□□□□ 0.56
LSM5-204ENST00000409909 BHMTQ93088 406 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 THAP9Q9H5L6 903 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 ACP6Q9NPH0 428 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 DNAJC17Q9NVM6 304 aaKnown RBP18.54■□□□□ 0.56
LSM5-204ENST00000409909 GMEB2Q9UKD1 530 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 AGO1Q9UL18 857 aaKnown RBP18.54■□□□□ 0.56
LSM5-204ENST00000409909 STRIP2Q9ULQ0 834 aa18.54■□□□□ 0.56
LSM5-204ENST00000409909 ADAM23O75077 832 aa18.53■□□□□ 0.56
LSM5-204ENST00000409909 RETP07949 1114 aa18.53■□□□□ 0.56
LSM5-204ENST00000409909 CISD3P0C7P0 127 aa18.53■□□□□ 0.56
LSM5-204ENST00000409909 PON1P27169 355 aa18.53■□□□□ 0.56
LSM5-204ENST00000409909 ERCC5P28715 1186 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms