RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 EIF2B5Q13144 721 aaKnown RBP5.21□□□□□ -1.58
CLK1-203ENST00000409769 BMPR2Q13873 1038 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 CCDC181Q5TID7 509 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 VPS53Q5VIR6 699 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 SLC15A4Q8N697 577 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 VGLL2Q8N8G2 317 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 TIFAQ96CG3 184 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 SARGQ9BW04 601 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 ACTRT3Q9BYD9 372 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 TPSD1Q9BZJ3 242 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 TTYH3Q9C0H2 523 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 CPNE7Q9UBL6 633 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 AFF4Q9UHB7 1163 aaKnown RBP5.21□□□□□ -1.58
CLK1-203ENST00000409769 ST3GAL5Q9UNP4 418 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 SH2B3Q9UQQ2 575 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 SSX2IPQ9Y2D8 614 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 ABCC6O95255 1503 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 LMO7Q8WWI1 1683 aa5.21□□□□□ -1.58
CLK1-203ENST00000409769 RTL1A6NKG5 1358 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 RGPD2P0DJD1 1756 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 IKBKBO14920 756 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 TLR5O60602 858 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 PHKG2P15735 406 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 DRD4P21917 467 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 KLRC1P26715 233 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 TNNT2P45379 298 aaPredicted RBP5.2□□□□□ -1.58
CLK1-203ENST00000409769 CCT8P50990 548 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 DGKEP52429 567 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 TUBA4AP68366 448 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 E2F2Q14209 437 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 MGAT5BQ3V5L5 792 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 CEP85Q6P2H3 762 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 DDB2Q92466 427 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 PHKBQ93100 1093 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 RFKQ969G6 155 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 ZC3H10Q96K80 434 aaKnown RBP5.2□□□□□ -1.58
CLK1-203ENST00000409769 STRBPQ96SI9 672 aaKnown RBP5.2□□□□□ -1.58
CLK1-203ENST00000409769 DHX36Q9H2U1 1008 aaKnown RBP5.2□□□□□ -1.58
CLK1-203ENST00000409769 NRIP3Q9NQ35 241 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 COL20A1Q9P218 1284 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 NDRG4Q9ULP0 352 aaKnown RBP5.2□□□□□ -1.58
CLK1-203ENST00000409769 CAMTA1Q9Y6Y1 1673 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 BLMP54132 1417 aaPredicted RBP5.2□□□□□ -1.58
CLK1-203ENST00000409769 MAP3K19Q56UN5 1328 aa5.2□□□□□ -1.58
CLK1-203ENST00000409769 FLT4P35916 1363 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 FAM208AQ9UK61 1670 aaKnown RBP5.19□□□□□ -1.58
CLK1-203ENST00000409769 VWC2LB2RUY7 222 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 TARM1B6A8C7 271 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 CCP110O43303 1012 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 ONECUT2O95948 504 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 BRAFP15056 766 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 ZFXP17010 805 aaPredicted RBP5.19□□□□□ -1.58
CLK1-203ENST00000409769 GNALP38405 381 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 MYO1EQ12965 1108 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 RRS1Q15050 365 aaKnown RBP5.19□□□□□ -1.58
CLK1-203ENST00000409769 MTX3Q5HYI7 312 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 ZNF618Q5T7W0 954 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 ZNF551Q7Z340 670 aaPredicted RBP5.19□□□□□ -1.58
CLK1-203ENST00000409769 ZNF804AQ7Z570 1209 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 C11orf96Q7Z7L8 435 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 SESTD1Q86VW0 696 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.19□□□□□ -1.58
CLK1-203ENST00000409769 KCNH5Q8NCM2 988 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 OR56A3Q8NH54 315 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 FBXO41Q8TF61 875 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 ATRIPQ8WXE1 791 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 TBC1D5Q92609 795 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 FKBP10Q96AY3 582 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 CCDC136Q96JN2 1154 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 UNKQ9C0B0 810 aaKnown RBP5.19□□□□□ -1.58
CLK1-203ENST00000409769 MS4A7Q9GZW8 240 aaPredicted RBP5.19□□□□□ -1.58
CLK1-203ENST00000409769 ZNF287Q9HBT7 754 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 SERTAD4Q9NUC0 356 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 ZSCAN32Q9NX65 697 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 OGDHLQ9ULD0 1010 aa5.19□□□□□ -1.58
CLK1-203ENST00000409769 CPDO75976 1380 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 NCAPD2Q15021 1401 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 PYCARD-AS1I3L0S3 204 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 SLC16A3O15427 465 aaKnown RBP5.18□□□□□ -1.58
CLK1-203ENST00000409769 JTBO76095 146 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 CSF1RP07333 972 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 HNRNPCP07910 306 aaKnown RBP eCLIP5.18□□□□□ -1.58
CLK1-203ENST00000409769 PRR35P0CG20 571 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 NR2F6P10588 404 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 KCNA3P22001 575 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 KELP23276 732 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 HOXC9P31274 260 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 TFF2Q03403 129 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 DCAF12L1Q5VU92 463 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 C11orf87Q6NUJ2 197 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 PPP4R4Q6NUP7 873 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 RPL36ALQ969Q0 106 aaKnown RBP5.18□□□□□ -1.58
CLK1-203ENST00000409769 SPSB4Q96A44 273 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 LRRC59Q96AG4 307 aaKnown RBP5.18□□□□□ -1.58
CLK1-203ENST00000409769 SERHLQ9NQF3 203 aa5.18□□□□□ -1.58
CLK1-203ENST00000409769 DLG5Q8TDM6 1919 aa5.17□□□□□ -1.58
CLK1-203ENST00000409769 COL14A1Q05707 1796 aaKnown RBP5.17□□□□□ -1.58
CLK1-203ENST00000409769 ANO9A1A5B4 782 aa5.17□□□□□ -1.58
CLK1-203ENST00000409769 PPM1DO15297 605 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms