RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 H0Y858 1186 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 CCDC188H7C350 402 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 JCHAINP01591 159 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 COMTP21964 271 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 SPRP35270 261 aaPredicted RBP8.65□□□□□ -1.02
SCN9A-203ENST00000409672 LAMTOR4Q0VGL1 99 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 PTPAQ15257 358 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 PREPLQ4J6C6 727 aaPredicted RBP8.65□□□□□ -1.02
SCN9A-203ENST00000409672 CHPFQ8IZ52 775 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 RFFLQ8WZ73 363 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 JMJD4Q9H9V9 463 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 CXCL14O95715 111 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 LBPP18428 481 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 PFKPQ01813 784 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 TRADDQ15628 312 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 IQSEC1Q6DN90 963 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 DNAJC14Q6Y2X3 702 aaPredicted RBP8.65□□□□□ -1.02
SCN9A-203ENST00000409672 WDR36Q8NI36 951 aaKnown RBP8.65□□□□□ -1.02
SCN9A-203ENST00000409672 ING5Q8WYH8 240 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 REXO5Q96IC2 774 aaKnown RBP8.65□□□□□ -1.02
SCN9A-203ENST00000409672 SIRPGQ9P1W8 387 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 RNF14Q9UBS8 474 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 TMCC3Q9ULS5 477 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 HPS5Q9UPZ3 1129 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 ANGPT4Q9Y264 503 aa8.65□□□□□ -1.02
SCN9A-203ENST00000409672 PLEKP08567 350 aaPredicted RBP8.65□□□□□ -1.03
SCN9A-203ENST00000409672 MYH10P35580 1976 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TRIM25Q14258 630 aaKnown RBP8.65□□□□□ -1.03
SCN9A-203ENST00000409672 C3orf67Q6ZVT6 689 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 NEDD1Q8NHV4 660 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 GTF3C2Q8WUA4 911 aaPredicted RBP8.65□□□□□ -1.03
SCN9A-203ENST00000409672 SPATC1LQ9H0A9 340 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 ZMYND8Q9ULU4 1186 aaPredicted RBP8.65□□□□□ -1.03
SCN9A-203ENST00000409672 STK36Q9NRP7 1315 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TBC1D3DA0A087WVF3 549 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TBC1D3IA0A087WXS9 549 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TBC1D3EA0A087X179 549 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TBC1D3KA0A087X1G2 549 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 PIPSLA2A3N6 862 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TBC1D3FA6NER0 549 aaPredicted RBP8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TBC1D3LB9A6J9 549 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 FAM86B1E9PN63 330 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TK2O00142 265 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TBC1D3HP0C7X1 549 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 ZNF24P17028 368 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TBX4P57082 545 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 DHX34Q14147 1143 aaKnown RBP8.65□□□□□ -1.03
SCN9A-203ENST00000409672 UBXN2BQ14CS0 331 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TBC1D3GQ6DHY5 549 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TBC1D3CQ6IPX1 549 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 SERPINA13PQ6UXR4 307 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 PACS1Q6VY07 963 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 DENND6AQ8IWF6 608 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TBC1D3Q8IZP1 549 aaPredicted RBP8.65□□□□□ -1.03
SCN9A-203ENST00000409672 OR8H2Q8N162 312 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 ATG4AQ8WYN0 398 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 TMEM159Q96B96 161 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 SCN3BQ9NY72 215 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 CIDEBQ9UHD4 219 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 ZCCHC11Q5TAX3 1644 aaKnown RBP8.65□□□□□ -1.03
SCN9A-203ENST00000409672 NPC1L1Q9UHC9 1359 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 SPATA31A1Q5TZJ5 1347 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 CCDC22O60826 627 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 ATP6V1B1P15313 513 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 AKT2P31751 481 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 CCNIQ14094 377 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 FAM171BQ6P995 826 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 SCUBE3Q8IX30 993 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 SPATA20Q8TB22 786 aa8.65□□□□□ -1.03
SCN9A-203ENST00000409672 BUD23O43709 281 aaKnown RBP8.64□□□□□ -1.03
SCN9A-203ENST00000409672 CAP2P40123 477 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 TUBP50607 506 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 PLK1P53350 603 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 TGM3Q08188 693 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 LAMB3Q13751 1172 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 AGAP9Q5VTM2 703 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 C16orf86Q6ZW13 317 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 FAM20CQ8IXL6 584 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 SH2D3CQ8N5H7 860 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 ACTR8Q9H981 624 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 STON1Q9Y6Q2 735 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 TNS3Q68CZ2 1445 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 FAM25AB3EWG3 89 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 FAM25CB3EWG5 89 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 FAM25GB3EWG6 89 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 GLP2RO95838 553 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 HERVK_113P62684 666 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 DENND1BQ6P3S1 775 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 RUSC1Q9BVN2 902 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 TMEM8AQ9HCN3 771 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 ITGA3P26006 1051 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 FMO4P31512 558 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 HSPA9P38646 679 aaKnown RBP8.64□□□□□ -1.03
SCN9A-203ENST00000409672 PNPLA4P41247 253 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 GABPB1Q06547 395 aaPredicted RBP8.64□□□□□ -1.03
SCN9A-203ENST00000409672 RAPSNQ13702 412 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 ACVR2BQ13705 512 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 MAB21L3Q8N8X9 362 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 OR6K2Q8NGY2 324 aa8.64□□□□□ -1.03
SCN9A-203ENST00000409672 EVA1BQ9NVM1 165 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms