RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SPTBN4Q9H254 2564 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 TBC1D3BA6NDS4 549 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 GREM1O60565 184 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 GADD45BO75293 160 aaPredicted RBP15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 TBX18O95935 607 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 ZBED1O96006 694 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 SETSIPP0DME0 302 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 BMP6P22004 513 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 TGM1P22735 817 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 BST2Q10589 180 aaKnown RBP15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 BYSLQ13895 437 aaKnown RBP15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 CNGA2Q16280 664 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 CRY1Q16526 586 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 ANO4Q32M45 955 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 USP39Q53GS9 565 aaKnown RBP15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 C2orf27AQ580R0 203 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 EOGTQ5NDL2 527 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 KLHL10Q6JEL2 608 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 TRIM59Q8IWR1 403 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 BBS7Q8IWZ6 715 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 ETFBKMTQ8IXQ9 262 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 EHBP1Q8NDI1 1231 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 TSTD1Q8NFU3 115 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 ARID3AQ99856 593 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 NMUR1Q9HB89 426 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 POLMQ9NP87 494 aaPredicted RBP15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 OSER1Q9NX31 292 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 STRIP2Q9ULQ0 834 aa15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.27■□□□□ 0.04
NIF3L1-205ENST00000409588 RHOBTB1O94844 696 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 SLC6A11P48066 632 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 PGFP49763 221 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 TKTL1P51854 596 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 KCNH2Q12809 1159 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 LCLAT1Q6UWP7 414 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 SCD5Q86SK9 330 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 TMEM25Q86YD3 366 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 FAM160A2Q8N612 972 aaPredicted RBP15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 UBR7Q8N806 425 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 MLKLQ8NB16 471 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 LMO3Q8TAP4 145 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 SRRTQ9BXP5 876 aaKnown RBP15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 LRRC4Q9HBW1 653 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 CNGB3Q9NQW8 809 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 RWDD2AQ9UIY3 292 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 TSPAN16Q9UKR8 245 aa15.26■□□□□ 0.03
NIF3L1-205ENST00000409588 MYH10P35580 1976 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 ZBTB24O43167 697 aaPredicted RBP15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 CACNG3O60359 315 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 TULP3O75386 442 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 AFPP02771 609 aaKnown RBP15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 CD19P15391 556 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 KIR2DL1P43626 348 aaPredicted RBP15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 YWHAGP61981 247 aaKnown RBP eCLIP15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 ELF2Q15723 593 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 NAIF1Q69YI7 327 aaPredicted RBP15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 SDE2Q6IQ49 451 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 TMEM270Q6UE05 265 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 Q6ZNB5 142 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 RSRC2Q7L4I2 434 aaKnown RBP15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 ENOSF1Q7L5Y1 443 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 RASSF3Q86WH2 238 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 PPM1KQ8N3J5 372 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 PHTF2Q8N3S3 785 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 IL17RCQ8NAC3 791 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 CNOT6LQ96LI5 555 aaKnown RBP15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 HSFY1Q96LI6 401 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 IPO9Q96P70 1041 aaKnown RBP15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 BBS2Q9BXC9 721 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 IRX2Q9BZI1 471 aaPredicted RBP15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 ABCC13Q9NSE7 274 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 SEMA4GQ9NTN9 838 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 USP18Q9UMW8 372 aa15.25■□□□□ 0.03
NIF3L1-205ENST00000409588 GPR179Q6PRD1 2367 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 O00370 1275 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 BIN1O00499 593 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 NPC1O15118 1278 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 STC2O76061 302 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 IRF1P10914 325 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 TYRP14679 529 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 ZNF132P52740 706 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 ZNF445P59923 1031 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 PDE4CQ08493 712 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 SPEM2Q0P670 501 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 MEA1Q16626 185 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 GOLGA7BQ2TAP0 167 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 SPDYCQ5MJ68 293 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 GRAMD4Q6IC98 578 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 TTC30AQ86WT1 665 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 SIX6OS1Q8N1H7 587 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 TERB1Q8NA31 727 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 RNF139Q8WU17 664 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 SLC35F5Q8WV83 523 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 IRGQQ8WZA9 623 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 PLD4Q96BZ4 506 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 RMDN1Q96DB5 314 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 HHIPQ96QV1 700 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 RTKNQ9BST9 563 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 MARCH2Q9P0N8 246 aa15.24■□□□□ 0.03
NIF3L1-205ENST00000409588 FBXO10Q9UK96 956 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms