RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ITGA7Q13683 1181 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 ZRANB3Q5FWF4 1079 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 SLC25A41Q8N5S1 370 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 AFF4Q9UHB7 1163 aaKnown RBP17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 CDY1Q9Y6F8 540 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 HEATR9A2RTY3 570 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 VPS26AO75436 327 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 PMPCBO75439 489 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 FGF19O95750 216 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 USP41Q3LFD5 358 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 ANO5Q75V66 913 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 KIAA0319LQ8IZA0 1049 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 MYCBPAPQ8TBZ2 947 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 YY1AP1Q9H869 796 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 SYTL2Q9HCH5 934 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 ST3GAL5Q9UNP4 418 aa17.33■□□□□ 0.37
PCDHA13-202ENST00000409494 DARSP14868 501 aaKnown RBP17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 KCNJ1P48048 391 aa17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 LRRC55Q6ZSA7 311 aa17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 SH3BP5LQ7L8J4 393 aa17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 TRPM8Q7Z2W7 1104 aa17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 RGPD8O14715 1765 aaPredicted RBP17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 ARHGEF19Q8IW93 802 aa17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 FAR2Q96K12 515 aa17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 MFSD14AQ96MC6 490 aa17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 GGT7Q9UJ14 662 aa17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 PCDHA3Q9Y5H8 950 aa17.33■□□□□ 0.36
PCDHA13-202ENST00000409494 TMEM150BA6NC51 233 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 ERI2A8K979 691 aaKnown RBP17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 ADH1AP07327 375 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 CYP2F1P24903 491 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 SCNN1GP51170 649 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 VCPP55072 806 aaKnown RBP17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 HIST2H2ACQ16777 129 aaPredicted RBP17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 NBPF20Q3BBV1 942 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 HIST2H2AA3Q6FI13 130 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 KDELC2Q7Z4H8 507 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 CARNMT1Q8N4J0 409 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 KCNV2Q8TDN2 545 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 TASP1Q9H6P5 420 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 TRMT6Q9UJA5 497 aaKnown RBP17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 RPS6KL1Q9Y6S9 549 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 CCT8L1PA6NM43 557 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 RHOBTB1O94844 696 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 TUSC3Q13454 348 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 KYNUQ16719 465 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 HASPINQ8TF76 798 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 UPF1Q92900 1129 aaKnown RBP eCLIP17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 Q9Y3F1 56 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 SIGLEC16A6NMB1 481 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 SYNCRIPO60506 623 aaKnown RBP17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 B4GALT4O60513 344 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 NPR3P17342 541 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 MAPK8P45983 427 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 DDIASQ8IXT1 998 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 ANKRD52Q8NB46 1076 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 HELQQ8TDG4 1101 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 SHC3Q92529 594 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 WNT8BQ93098 351 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 MTMR8Q96EF0 704 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 SIK3Q9Y2K2 1263 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 ASTN1O14525 1302 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 TMEM120BA0PK00 339 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 LZTS3O60299 673 aaPredicted RBP17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 KRT4P19013 534 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 ATP5C1P36542 298 aaKnown RBP17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 ORC1Q13415 861 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 PRAMEF19Q5SWL8 479 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 ARMC6Q6NXE6 501 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 C4orf32Q8N8J7 132 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 FAM105AQ9NUU6 356 aa17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 VIRMAQ69YN4 1812 aaKnown RBP17.32■□□□□ 0.36
PCDHA13-202ENST00000409494 ARHGAP10A1A4S6 786 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 AARSP49588 968 aaKnown RBP eCLIP17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 ARL4DP49703 201 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 POLE2P56282 527 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 ANGPTL8Q6UXH0 198 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 FAM71AQ8IYT1 594 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 CXorf38Q8TB03 319 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 MAML3Q96JK9 1138 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 SLC24A2Q9UI40 661 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 ZBTB39O15060 712 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 GLRA3O75311 464 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 GLI1P08151 1106 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 CHRM3P20309 590 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 NPY2RP49146 381 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 ITGA9Q13797 1035 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 OOSP2Q86WS3 158 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 LRRC43Q8N309 656 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 SLC7A5P2Q9GIP4 190 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 RWDD3Q9Y3V2 267 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 SUPT3HO75486 399 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 SELPP16109 830 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 CES5AQ6NT32 575 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 TMBIM4Q9HC24 238 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 DCDC2Q9UHG0 476 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 KLHL2O95198 593 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 LAG3P18627 525 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms