RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 FAM221BA6H8Z2 402 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 GFRA2O00451 464 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 NPC1O15118 1278 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 CER1O95813 267 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 DLATP10515 647 aaKnown RBP8.2□□□□□ -1.1
LSM5-202ENST00000409292 TIMP2P16035 220 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 GABRG2P18507 467 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 LMO2P25791 158 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 OXTRP30559 389 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 ZNF132P52740 706 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 SNRPFP62306 86 aaKnown RBP8.2□□□□□ -1.1
LSM5-202ENST00000409292 ARID5AQ03989 594 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 WDR72Q3MJ13 1102 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 EMC10Q5UCC4 262 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 KIAA1324Q6UXG2 1013 aaKnown RBP8.2□□□□□ -1.1
LSM5-202ENST00000409292 TRAPPC11Q7Z392 1133 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 NAXDQ8IW45 347 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 DEFB119Q8N690 84 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 B3GALNT2Q8NCR0 500 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 SETD7Q8WTS6 366 aaKnown RBP8.2□□□□□ -1.1
LSM5-202ENST00000409292 ADAMTS14Q8WXS8 1223 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 TMX3Q96JJ7 454 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 CDC6Q99741 560 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 DUSP9Q99956 384 aaKnown RBP8.2□□□□□ -1.1
LSM5-202ENST00000409292 BBS2Q9BXC9 721 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 RNF38Q9H0F5 515 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 KDM4CQ9H3R0 1056 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 CAPN10Q9HC96 672 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 CRTAC1Q9NQ79 661 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 TLR8Q9NR97 1041 aaKnown RBP8.2□□□□□ -1.1
LSM5-202ENST00000409292 DNAJC17Q9NVM6 304 aaKnown RBP8.2□□□□□ -1.1
LSM5-202ENST00000409292 MBD1Q9UIS9 605 aaPredicted RBP8.2□□□□□ -1.1
LSM5-202ENST00000409292 SIX4Q9UIU6 781 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 STARD13Q9Y3M8 1113 aa8.2□□□□□ -1.1
LSM5-202ENST00000409292 OBSL1O75147 1896 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 IGHV1OR15-9A0A0B4J2B8 117 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 NEDD8-MDP1E9PL57 170 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 SCAMP3O14828 347 aaKnown RBP8.19□□□□□ -1.1
LSM5-202ENST00000409292 WIPF1O43516 503 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 SH3BP5O60239 455 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 SYNCRIPO60506 623 aaKnown RBP8.19□□□□□ -1.1
LSM5-202ENST00000409292 ADAM23O75077 832 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 FTH1P19P0C7X4 201 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 IRF1P10914 325 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 ACADMP11310 421 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 CD6P30203 668 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 ATP5C1P36542 298 aaKnown RBP8.19□□□□□ -1.1
LSM5-202ENST00000409292 WASP42768 502 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 AP3M2P53677 418 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 SCAPQ12770 1279 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 BIRC3Q13489 604 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 SNRNP35Q16560 246 aaKnown RBP8.19□□□□□ -1.1
LSM5-202ENST00000409292 INAVAQ3KP66 663 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 ZNF667Q5HYK9 610 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 MRPL14Q6P1L8 145 aaKnown RBP8.19□□□□□ -1.1
LSM5-202ENST00000409292 RAB44Q7Z6P3 723 aaPredicted RBP8.19□□□□□ -1.1
LSM5-202ENST00000409292 GALNT15Q8N3T1 639 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 IPO4Q8TEX9 1081 aaKnown RBP8.19□□□□□ -1.1
LSM5-202ENST00000409292 KBTBD7Q8WVZ9 684 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 CCDC127Q96BQ5 260 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 SMARCD1Q96GM5 515 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 EPSTI1Q96J88 318 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 STRA6Q9BX79 667 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 C1QTNF2Q9BXJ5 285 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 MIR1-1HGQ9H1L0 117 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 CUEDC2Q9H467 287 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 HSPBP1Q9NZL4 362 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 CGNQ9P2M7 1197 aaKnown RBP8.19□□□□□ -1.1
LSM5-202ENST00000409292 NXF1Q9UBU9 619 aaKnown RBP8.19□□□□□ -1.1
LSM5-202ENST00000409292 CHORDC1Q9UHD1 332 aaPredicted RBP8.19□□□□□ -1.1
LSM5-202ENST00000409292 ZNF510Q9Y2H8 683 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 NFE2L3Q9Y4A8 694 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 MAP4K5Q9Y4K4 846 aa8.19□□□□□ -1.1
LSM5-202ENST00000409292 SRPRBQ9Y5M8 271 aaKnown RBP8.19□□□□□ -1.1
LSM5-202ENST00000409292 CACNA1EQ15878 2313 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 FASNP49327 2511 aaKnown RBP8.18□□□□□ -1.1
LSM5-202ENST00000409292 TAF4O00268 1085 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 EIF3DO15371 548 aaKnown RBP eCLIP8.18□□□□□ -1.1
LSM5-202ENST00000409292 COCHO43405 550 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 HCRTO43612 131 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 TLR5O60602 858 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 STAU1O95793 577 aaKnown RBP8.18□□□□□ -1.1
LSM5-202ENST00000409292 CYBBP04839 570 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 CD59P13987 128 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 HNRNPLP14866 589 aaKnown RBP eCLIP8.18□□□□□ -1.1
LSM5-202ENST00000409292 MATKP42679 507 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 DGKGP49619 791 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 KCNA1Q09470 495 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 TEAD4Q15561 434 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 CCDC142Q17RM4 750 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 GAB4Q2WGN9 574 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 ZNF699Q32M78 642 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 SNX30Q5VWJ9 437 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 C19orf48Q6RUI8 117 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 HTR3DQ70Z44 454 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 LIMS2Q7Z4I7 341 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 PDZD3Q86UT5 571 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 C12orf40Q86WS4 652 aa8.18□□□□□ -1.1
LSM5-202ENST00000409292 TMEM25Q86YD3 366 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms