RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 M0QYT0 321 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 NBNO60934 754 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 ZBED1O96006 694 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 USP17L7P0C7H9 530 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 BDNFP23560 247 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 RPL22P35268 128 aaKnown RBP19.72■□□□□ 0.75
USP39-202ENST00000409025 SKOR1P84550 965 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 YWHAHQ04917 246 aaPredicted RBP19.72■□□□□ 0.75
USP39-202ENST00000409025 DMTNQ08495 405 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 UBAP2Q5T6F2 1119 aaKnown RBP19.72■□□□□ 0.75
USP39-202ENST00000409025 SYPL2Q5VXT5 272 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 KDM7AQ6ZMT4 941 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 BNIPLQ7Z465 357 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 FAM71DQ8N9W8 422 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 UHMK1Q8TAS1 419 aaKnown RBP19.72■□□□□ 0.75
USP39-202ENST00000409025 RBM15Q96T37 977 aaKnown RBP eCLIP19.72■□□□□ 0.75
USP39-202ENST00000409025 ELAC1Q9H777 363 aaKnown RBP19.72■□□□□ 0.75
USP39-202ENST00000409025 DMAP1Q9NPF5 467 aaPredicted RBP19.72■□□□□ 0.75
USP39-202ENST00000409025 TMLHEQ9NVH6 421 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 NAALADL1Q9UQQ1 740 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 HEY1Q9Y5J3 304 aa19.72■□□□□ 0.75
USP39-202ENST00000409025 DNAH12Q6ZR08 3092 aa19.71■□□□□ 0.75
USP39-202ENST00000409025 YJEFN3A6XGL0 299 aa19.71■□□□□ 0.75
USP39-202ENST00000409025 E7ENQ6 273 aa19.71■□□□□ 0.75
USP39-202ENST00000409025 B4GALT3O60512 393 aa19.71■□□□□ 0.75
USP39-202ENST00000409025 ACSL3O95573 720 aa19.71■□□□□ 0.75
USP39-202ENST00000409025 CAPN2P17655 700 aa19.71■□□□□ 0.75
USP39-202ENST00000409025 OR1G1P47890 313 aa19.71■□□□□ 0.75
USP39-202ENST00000409025 DEUP1Q05D60 604 aa19.71■□□□□ 0.75
USP39-202ENST00000409025 EMC10Q5UCC4 262 aa19.71■□□□□ 0.75
USP39-202ENST00000409025 OTUD1Q5VV17 481 aaPredicted RBP19.71■□□□□ 0.75
USP39-202ENST00000409025 TMEM209Q96SK2 561 aa19.71■□□□□ 0.75
USP39-202ENST00000409025 MTMR10Q9NXD2 777 aa19.71■□□□□ 0.75
USP39-202ENST00000409025 SYNJ2BP-COX16A0A087WUM0 186 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 ENPP3O14638 875 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 LTFP02788 710 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 ARL4AP40617 200 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 CTCFP49711 727 aaPredicted RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 PITX1P78337 314 aaPredicted RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 KYNUQ16719 465 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 PLEKHG4Q58EX7 1191 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 C6orf118Q5T5N4 469 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 FAM43BQ6ZT52 329 aaPredicted RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 LRRTM3Q86VH5 581 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 PPIL6Q8IXY8 311 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 ABI1Q8IZP0 508 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 ARFGAP2Q8N6H7 521 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 DBF4BQ8NFT6 615 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 IRGQQ8WZA9 623 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 DEFB118Q96PH6 123 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 ROPN1BQ9BZX4 212 aaPredicted RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 ROPN1Q9HAT0 212 aaPredicted RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 LRRC4CQ9HCJ2 640 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 PAK6Q9NQU5 681 aaPredicted RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 RRN3Q9NYV6 651 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 NINJ2Q9NZG7 142 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 COX16Q9P0S2 106 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 RCOR3Q9P2K3 495 aaPredicted RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 NOVA2Q9UNW9 492 aaKnown RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 PCDHB7Q9Y5E2 793 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 TLDC2A0PJX2 215 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 CFAP69A5D8W1 941 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 A6NNZ2 444 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 PITPNM1O00562 1244 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 TRAPPC3O43617 180 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 MYCP01106 439 aaPredicted RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 FYNP06241 537 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 NME3Q13232 169 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 SKIDA1Q1XH10 827 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 TUBB8Q3ZCM7 444 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 C4orf50Q6ZRC1 276 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 SPATA2LQ8IUW3 424 aaPredicted RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 SLC7A14Q8TBB6 771 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 SEPT8Q92599 483 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 PRCCQ92733 491 aaPredicted RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 PGM2Q96G03 612 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 CSPG4P5Q96PW8 444 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 CAPS2Q9BXY5 557 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 PNPLA8Q9NP80 782 aa19.7■□□□□ 0.74
USP39-202ENST00000409025 FARP1Q9Y4F1 1045 aaPredicted RBP19.7■□□□□ 0.74
USP39-202ENST00000409025 NCAM1P13591 858 aa19.69■□□□□ 0.74
USP39-202ENST00000409025 MAGEA4P43358 317 aa19.69■□□□□ 0.74
USP39-202ENST00000409025 MAGEB5Q9BZ81 275 aa19.69■□□□□ 0.74
USP39-202ENST00000409025 PRDM16Q9HAZ2 1276 aa19.69■□□□□ 0.74
USP39-202ENST00000409025 SAYSD1Q9NPB0 183 aa19.69■□□□□ 0.74
USP39-202ENST00000409025 CWC15Q9P013 229 aaKnown RBP19.69■□□□□ 0.74
USP39-202ENST00000409025 SMAPO00193 183 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 RASGRF2O14827 1237 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 ACTN2P35609 894 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 NR2C2P49116 596 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 ATP1A2P50993 1020 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 GPNMBQ14956 572 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 SCML4Q8N228 414 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 APBB2Q92870 758 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 SLC9A7Q96T83 725 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 DNAJB4Q9UDY4 337 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 PRG3Q9Y2Y8 225 aaPredicted RBP19.68■□□□□ 0.74
USP39-202ENST00000409025 BCLAF3A2AJT9 711 aaKnown RBP19.68■□□□□ 0.74
USP39-202ENST00000409025 SMIM23A6NLE4 172 aa19.68■□□□□ 0.74
USP39-202ENST00000409025 RGS16O15492 202 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms