RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 MIPP30301 263 aa21.36■■□□□ 1.01
CHKB-201ENST00000406938 GJC1P36383 396 aa21.36■■□□□ 1.01
CHKB-201ENST00000406938 ATXN1P54253 815 aaKnown RBP21.36■■□□□ 1.01
CHKB-201ENST00000406938 SLC25A11Q02978 314 aaKnown RBP21.36■■□□□ 1.01
CHKB-201ENST00000406938 ELMSAN1Q6PJG2 1045 aa21.36■■□□□ 1.01
CHKB-201ENST00000406938 BNIPLQ7Z465 357 aa21.36■■□□□ 1.01
CHKB-201ENST00000406938 TMC8Q8IU68 726 aa21.36■■□□□ 1.01
CHKB-201ENST00000406938 VN1R2Q8NFZ6 395 aa21.36■■□□□ 1.01
CHKB-201ENST00000406938 RNF139Q8WU17 664 aa21.36■■□□□ 1.01
CHKB-201ENST00000406938 SMOC2Q9H3U7 446 aa21.36■■□□□ 1.01
CHKB-201ENST00000406938 NSUN3Q9H649 340 aaKnown RBP21.36■■□□□ 1.01
CHKB-201ENST00000406938 FAM204AQ9H8W3 233 aa21.36■■□□□ 1.01
CHKB-201ENST00000406938 MTCL1Q9Y4B5 1905 aaKnown RBP21.35■■□□□ 1.01
CHKB-201ENST00000406938 TRIOBPQ9H2D6 2365 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 SYNJ2BP-COX16A0A087WUM0 186 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 CCDC66A2RUB6 948 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 ZNF840PA6NDX5 716 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 SPDYE4A6NLX3 237 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 PSTPIP1O43586 416 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 HNRNPA1P09651 372 aaKnown RBP eCLIP21.35■■□□□ 1.01
CHKB-201ENST00000406938 RALAP11233 206 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 CTNNA2P26232 953 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 NME3Q13232 169 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 ZNF697Q5TEC3 545 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 SNX30Q5VWJ9 437 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 PAPD7Q5XG87 772 aaKnown RBP21.35■■□□□ 1.01
CHKB-201ENST00000406938 RHOT1Q8IXI2 618 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 UBL4BQ8N7F7 174 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 ALG3Q92685 438 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 IL21Q9HBE4 155 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 DDIT4Q9NX09 232 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 ZDHHC7Q9NXF8 308 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 TRPM5Q9NZQ8 1165 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 COX16Q9P0S2 106 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 PCSK1NQ9UHG2 260 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 SNX12Q9UMY4 172 aa21.35■■□□□ 1.01
CHKB-201ENST00000406938 ENDOD1O94919 500 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 TRUB2O95900 331 aaKnown RBP21.34■■□□□ 1.01
CHKB-201ENST00000406938 IL1R2P27930 398 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 RDXP35241 583 aaKnown RBP21.34■■□□□ 1.01
CHKB-201ENST00000406938 AMPD2Q01433 879 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 DEUP1Q05D60 604 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 KCNC3Q14003 757 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 TCEAL5Q5H9L2 206 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 PRPF38BQ5VTL8 546 aaKnown RBP21.34■■□□□ 1.01
CHKB-201ENST00000406938 TXNRD3NBQ6F5E7 133 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 MSANTD2Q6P1R3 559 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 TMEM150AQ86TG1 271 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 HS6ST3Q8IZP7 471 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 CASP10Q92851 521 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 PGAP3Q96FM1 320 aaPredicted RBP21.34■■□□□ 1.01
CHKB-201ENST00000406938 PEBP4Q96S96 227 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 CORO1BQ9BR76 489 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 LRRC3Q9BY71 257 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 CCSER2Q9H7U1 834 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 ASAH2Q9NR71 780 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 PIGVQ9NUD9 493 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 USP18Q9UMW8 372 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 PCDHA3Q9Y5H8 950 aa21.34■■□□□ 1.01
CHKB-201ENST00000406938 SOX1O00570 391 aaPredicted RBP21.33■■□□□ 1.01
CHKB-201ENST00000406938 TLR5O60602 858 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 IGLV3-25P01717 112 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 F11P03951 625 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 PPP3CCP48454 512 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 GRIN2CQ14957 1233 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 HADHQ16836 314 aaKnown RBP21.33■■□□□ 1.01
CHKB-201ENST00000406938 LRRC38Q5VT99 294 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 SCYL2Q6P3W7 929 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 CYP4V2Q6ZWL3 525 aaPredicted RBP21.33■■□□□ 1.01
CHKB-201ENST00000406938 FAM131BQ86XD5 332 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 UBE2Q2Q8WVN8 375 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 NCAPGQ9BPX3 1015 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 IGFLR1Q9H665 355 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 ZWILCHQ9H900 591 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 OLA1Q9NTK5 396 aaKnown RBP21.33■■□□□ 1.01
CHKB-201ENST00000406938 HCFC1R1Q9NWW0 138 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 SFMBT1Q9UHJ3 866 aa21.33■■□□□ 1.01
CHKB-201ENST00000406938 KCNK3O14649 394 aa21.33■■□□□ 1
CHKB-201ENST00000406938 IRAK2O43187 625 aa21.33■■□□□ 1
CHKB-201ENST00000406938 MSI1O43347 362 aaKnown RBP21.33■■□□□ 1
CHKB-201ENST00000406938 PRPSAP2O60256 369 aa21.33■■□□□ 1
CHKB-201ENST00000406938 XYLBO75191 536 aa21.33■■□□□ 1
CHKB-201ENST00000406938 TBX18O95935 607 aa21.33■■□□□ 1
CHKB-201ENST00000406938 GABRR2P28476 465 aa21.33■■□□□ 1
CHKB-201ENST00000406938 CXCR5P32302 372 aa21.33■■□□□ 1
CHKB-201ENST00000406938 PEX5P50542 639 aa21.33■■□□□ 1
CHKB-201ENST00000406938 HYAL1Q12794 435 aa21.33■■□□□ 1
CHKB-201ENST00000406938 SMTNL2Q2TAL5 461 aa21.33■■□□□ 1
CHKB-201ENST00000406938 C10orf120Q5SQS8 335 aa21.33■■□□□ 1
CHKB-201ENST00000406938 GAREM2Q75VX8 874 aa21.33■■□□□ 1
CHKB-201ENST00000406938 POLNQ7Z5Q5 900 aa21.33■■□□□ 1
CHKB-201ENST00000406938 OSBPL9Q96SU4 736 aa21.33■■□□□ 1
CHKB-201ENST00000406938 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.33■■□□□ 1
CHKB-201ENST00000406938 MDM4O15151 490 aa21.32■■□□□ 1
CHKB-201ENST00000406938 SRGAP2O75044 1071 aa21.32■■□□□ 1
CHKB-201ENST00000406938 EFEMP1Q12805 493 aa21.32■■□□□ 1
CHKB-201ENST00000406938 PABPC1LQ4VXU2 614 aaKnown RBP21.32■■□□□ 1
CHKB-201ENST00000406938 DCAF12L1Q5VU92 463 aa21.32■■□□□ 1
CHKB-201ENST00000406938 ZNF707Q96C28 371 aaPredicted RBP21.32■■□□□ 1
CHKB-201ENST00000406938 ACSF2Q96CM8 615 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms