RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 TANGO2Q6ICL3 276 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 MSANTD2Q6P1R3 559 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 TMTC1Q8IUR5 882 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 C3orf20Q8ND61 904 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 ELSPBP1Q96BH3 223 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 ZFRQ96KR1 1074 aaKnown RBP30.68■■■□□ 2.5
USP42-202ENST00000404008 ZFP14Q9HCL3 533 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 SPTLC3Q9NUV7 552 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 LIMD1Q9UGP4 676 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 TMEM59LQ9UK28 342 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 CPQQ9Y646 472 aa30.68■■■□□ 2.5
USP42-202ENST00000404008 KIF26AQ9ULI4 1882 aaPredicted RBP30.68■■■□□ 2.5
USP42-202ENST00000404008 TCRBV5S1A1TA0A578 114 aa30.67■■■□□ 2.5
USP42-202ENST00000404008 CAPN9O14815 690 aa30.67■■■□□ 2.5
USP42-202ENST00000404008 ZXDBP98169 803 aa30.67■■■□□ 2.5
USP42-202ENST00000404008 EFEMP1Q12805 493 aa30.67■■■□□ 2.5
USP42-202ENST00000404008 SYPL2Q5VXT5 272 aa30.67■■■□□ 2.5
USP42-202ENST00000404008 TMEM139Q8IV31 216 aa30.67■■■□□ 2.5
USP42-202ENST00000404008 CCDC170Q8IYT3 715 aa30.67■■■□□ 2.5
USP42-202ENST00000404008 RSPRY1Q96DX4 576 aa30.67■■■□□ 2.5
USP42-202ENST00000404008 TRIM11Q96F44 468 aa30.67■■■□□ 2.5
USP42-202ENST00000404008 BAG1Q99933 345 aaPredicted RBP30.67■■■□□ 2.5
USP42-202ENST00000404008 KIF9Q9HAQ2 790 aa30.67■■■□□ 2.5
USP42-202ENST00000404008 METTL5Q9NRN9 209 aaKnown RBP30.67■■■□□ 2.5
USP42-202ENST00000404008 NUMBLQ9Y6R0 609 aa30.67■■■□□ 2.5
USP42-202ENST00000404008 ECI2O75521 394 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 ARCQ7LC44 396 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 DEFB106AQ8N104 65 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 CELF5Q8N6W0 485 aaKnown RBP30.66■■■□□ 2.5
USP42-202ENST00000404008 E2F7Q96AV8 911 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 KXD1Q9BQD3 176 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 SMPD4Q9NXE4 827 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 OBP2AQ9NY56 170 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 MARCH2Q9P0N8 246 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 RASAL2Q9UJF2 1139 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 MYBL1P10243 752 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 RNASE9P60153 205 aaKnown RBP30.66■■■□□ 2.5
USP42-202ENST00000404008 DCAF6Q58WW2 860 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 DNAJC24Q6P3W2 148 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 MIB1Q86YT6 1006 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 KLF16Q9BXK1 252 aaPredicted RBP30.66■■■□□ 2.5
USP42-202ENST00000404008 SMOC2Q9H3U7 446 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 KCNK12Q9HB15 430 aa30.66■■■□□ 2.5
USP42-202ENST00000404008 SOWAHDA6NJG2 315 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 ATMINO43313 823 aaPredicted RBP30.65■■■□□ 2.5
USP42-202ENST00000404008 TCF3P15923 654 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 MATKP42679 507 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 PPP1R15BQ5SWA1 713 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 RIN3Q8TB24 985 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 DQX1Q8TE96 717 aaKnown RBP30.65■■■□□ 2.5
USP42-202ENST00000404008 SH3RF2Q8TEC5 729 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 RSAD2Q8WXG1 361 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 NXPE3Q969Y0 559 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 ZNF653Q96CK0 615 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 LRRC3BQ96PB8 259 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 SELENOOQ9BVL4 669 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 IGSF9Q9P2J2 1179 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 SFMBT1Q9UHJ3 866 aa30.65■■■□□ 2.5
USP42-202ENST00000404008 HEPACAM2A8MVW5 462 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 DPYSL4O14531 572 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 ZNF263O14978 683 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 GJB6O95452 261 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 KRT3P12035 628 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 ABCB4P21439 1286 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 NOS2P35228 1153 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 FLT3P36888 993 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 USP4Q13107 963 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 ZNF77Q15935 545 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 PLEKHA7Q6IQ23 1121 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 VITQ6UXI7 678 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 RPP25Q9BUL9 199 aaKnown RBP30.64■■■□□ 2.5
USP42-202ENST00000404008 PLA2G2FQ9BZM2 168 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 THAP2Q9H0W7 228 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 GKN1Q9NS71 199 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 PARVAQ9NVD7 372 aa30.64■■■□□ 2.5
USP42-202ENST00000404008 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP30.64■■■□□ 2.5
USP42-202ENST00000404008 CNOT8Q9UFF9 292 aaKnown RBP30.64■■■□□ 2.5
USP42-202ENST00000404008 SIGLEC16A6NMB1 481 aa30.63■■■□□ 2.49
USP42-202ENST00000404008 LEFTY2O00292 366 aa30.63■■■□□ 2.49
USP42-202ENST00000404008 LCA5LO95447 670 aa30.63■■■□□ 2.49
USP42-202ENST00000404008 GALCP54803 685 aa30.63■■■□□ 2.49
USP42-202ENST00000404008 MAMLD1Q13495 774 aa30.63■■■□□ 2.49
USP42-202ENST00000404008 TRNP1Q6NT89 227 aa30.63■■■□□ 2.49
USP42-202ENST00000404008 DDX42Q86XP3 938 aaKnown RBP eCLIP30.63■■■□□ 2.49
USP42-202ENST00000404008 ADAMTS19Q8TE59 1207 aa30.63■■■□□ 2.49
USP42-202ENST00000404008 PDLIM2Q96JY6 352 aa30.63■■■□□ 2.49
USP42-202ENST00000404008 A0A0C4DFX4 3053 aa30.63■■■□□ 2.49
USP42-202ENST00000404008 MYO10Q9HD67 2058 aa30.62■■■□□ 2.49
USP42-202ENST00000404008 ANKRD62A6NC57 917 aa30.62■■■□□ 2.49
USP42-202ENST00000404008 ASGR2P07307 311 aa30.62■■■□□ 2.49
USP42-202ENST00000404008 CYLC1P35663 651 aaPredicted RBP30.62■■■□□ 2.49
USP42-202ENST00000404008 TAC4Q86UU9 113 aa30.62■■■□□ 2.49
USP42-202ENST00000404008 MFSD6LQ8IWD5 586 aa30.62■■■□□ 2.49
USP42-202ENST00000404008 EMC1Q8N766 993 aa30.62■■■□□ 2.49
USP42-202ENST00000404008 JOSD2Q8TAC2 188 aa30.62■■■□□ 2.49
USP42-202ENST00000404008 PACSIN1Q9BY11 444 aa30.62■■■□□ 2.49
USP42-202ENST00000404008 SLC12A8A0AV02 714 aa30.61■■■□□ 2.49
USP42-202ENST00000404008 MSI1O43347 362 aaKnown RBP30.61■■■□□ 2.49
USP42-202ENST00000404008 IGLV3-25P01717 112 aa30.61■■■□□ 2.49
USP42-202ENST00000404008 RFC1P35251 1148 aaPredicted RBP30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms