RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 ITGA9Q13797 1035 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 CYTH1Q15438 398 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 DNAL1Q4LDG9 190 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 RSBN1LQ6PCB5 846 aaPredicted RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 UNC5AQ6ZN44 842 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 PTAR1Q7Z6K3 402 aaPredicted RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 NME8Q8N427 588 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 OR6Y1Q8NGX8 325 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 MZB1Q8WU39 189 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 EZH1Q92800 747 aaPredicted RBP9.5□□□□□ -0.89
HPS4-203ENST00000402105 ANKRD36BP1Q96IX9 119 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 VCX3BQ9H321 246 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 TLE6Q9H808 572 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 VCX3AQ9NNX9 186 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 ASNSD1Q9NWL6 643 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 PLA2G4CQ9UP65 541 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 TTLL3Q9Y4R7 772 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 ASB3Q9Y575 518 aa9.5□□□□□ -0.89
HPS4-203ENST00000402105 H0YCG3 227 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 GOLGA8TH3BQL2 631 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 TYK2P29597 1187 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 SLC1A6P48664 564 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 COG7P83436 770 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 SLC25A11Q02978 314 aaKnown RBP9.49□□□□□ -0.89
HPS4-203ENST00000402105 CAPSQ13938 189 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 C11orf91Q3C1V1 193 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 DRICH1Q6PGQ1 229 aaPredicted RBP9.49□□□□□ -0.89
HPS4-203ENST00000402105 ARHGAP22Q7Z5H3 698 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 TRIM42Q8IWZ5 723 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 ICA1LQ8NDH6 482 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.49□□□□□ -0.89
HPS4-203ENST00000402105 GATA6Q92908 595 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 MPP4Q96JB8 637 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 MARK4Q96L34 752 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 PEBP4Q96S96 227 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 C17orf75Q9HAS0 396 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 ARHGEF4Q9NR80 690 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 ETNK2Q9NVF9 386 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 HBS1LQ9Y450 684 aaKnown RBP9.49□□□□□ -0.89
HPS4-203ENST00000402105 SBF2Q86WG5 1849 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 WDR46O15213 610 aaKnown RBP9.49□□□□□ -0.89
HPS4-203ENST00000402105 USP12O75317 370 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 OATP04181 439 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 SLC18A1P54219 525 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 PKNOX1P55347 436 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 Q3C1V9 767 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 LIN52Q52LA3 116 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 LRRC38Q5VT99 294 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 NET1Q7Z628 596 aaPredicted RBP9.49□□□□□ -0.89
HPS4-203ENST00000402105 SNRNP27Q8WVK2 155 aaKnown RBP9.49□□□□□ -0.89
HPS4-203ENST00000402105 RSAD1Q9HA92 442 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 GJA3Q9Y6H8 435 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 STRCQ7RTU9 1775 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 VWA5AO00534 786 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 APOL1O14791 398 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 RGS20O76081 388 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 METTL18O95568 372 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 HSPA4LO95757 839 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 TRUB2O95900 331 aaKnown RBP9.49□□□□□ -0.89
HPS4-203ENST00000402105 PRKCBP05771 671 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 KCNA2P16389 499 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 ADORA2AP29274 412 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 MLH1P40692 756 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 ACTR3P61158 418 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 TMED1Q13445 227 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 OLIG2Q13516 323 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 KRT72Q14CN4 511 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 CA9Q16790 459 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 HSF5Q4G112 596 aaPredicted RBP9.49□□□□□ -0.89
HPS4-203ENST00000402105 PAOXQ6QHF9 649 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 MTHFD1LQ6UB35 978 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 CMC1Q7Z7K0 106 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 C10orf107Q8IVU9 208 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 MAP7D3Q8IWC1 876 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 ATP2A3Q93084 1043 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 HIC2Q96JB3 615 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 PPCSQ9HAB8 311 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 ADAMTS6Q9UKP5 1117 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 INPP5FQ9Y2H2 1132 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 TEX264Q9Y6I9 313 aa9.49□□□□□ -0.89
HPS4-203ENST00000402105 COL16A1Q07092 1604 aaPredicted RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 C3orf70A6NLC5 250 aaPredicted RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 TPP1O14773 563 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 HNRNPRO43390 633 aaKnown RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 MED7O43513 233 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 MICAL2O94851 1124 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 ITGBL1O95965 494 aaPredicted RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 EGFRP00533 1210 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 SUPT20HL2P0C7V6 817 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 SPATA31D3P0C874 917 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 ENO3P13929 434 aaPredicted RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 STIP1P31948 543 aaKnown RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 TBL3Q12788 808 aaKnown RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 TFDP2Q14188 446 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 ACAP1Q15027 740 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 SUPT20HL1Q3ZLR7 823 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 ZNF772Q68DY9 489 aaPredicted RBP9.48□□□□□ -0.89
HPS4-203ENST00000402105 SPATA31D4Q6ZUB0 917 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 RAB3IL1Q8TBN0 382 aa9.48□□□□□ -0.89
HPS4-203ENST00000402105 PPP2R3CQ969Q6 453 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms