RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 RLFQ13129 1914 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 IQANK1A0A1B0GTG1 560 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 EME2A4GXA9 379 aaPredicted RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 LGR5O75473 907 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 AP1G2O75843 785 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 CCNHP51946 323 aaPredicted RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 PGGT1BP53609 377 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 YWHAZP63104 245 aaKnown RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 SLC10A2Q12908 348 aaPredicted RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 NOMO1Q15155 1222 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 SOWAHAQ2M3V2 549 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 MTHFD1LQ6UB35 978 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 KCNT2Q6UVM3 1135 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 NDUFAF2Q8N183 169 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 VPS52Q8N1B4 723 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 C10orf82Q8WW14 230 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 PPP1R36Q96LQ0 422 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 SRPK1Q96SB4 655 aaKnown RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 TRIM55Q9BYV6 548 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 FOXP3Q9BZS1 431 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 SMYD2Q9NRG4 433 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 CPSF2Q9P2I0 782 aaKnown RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 PPARGC1AQ9UBK2 798 aaKnown RBP11.51□□□□□ -0.57
SCFD2-202ENST00000401642 STARD13Q9Y3M8 1113 aa11.51□□□□□ -0.57
SCFD2-202ENST00000401642 ARID2Q68CP9 1835 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 KLHL33A6NCF5 533 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 KCNK1O00180 336 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 PRPF4O43172 522 aaKnown RBP eCLIP11.5□□□□□ -0.57
SCFD2-202ENST00000401642 ENO1P06733 434 aaKnown RBP11.5□□□□□ -0.57
SCFD2-202ENST00000401642 PDHA1P08559 390 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 IL4RP24394 825 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 NDUFV1P49821 464 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 MCCD1P59942 119 aaPredicted RBP11.5□□□□□ -0.57
SCFD2-202ENST00000401642 MXRA7P84157 204 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 CHI3L2Q15782 390 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 PAN2Q504Q3 1202 aaKnown RBP11.5□□□□□ -0.57
SCFD2-202ENST00000401642 RNF43Q68DV7 783 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 ADGRD1Q6QNK2 874 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 PDCD7Q8N8D1 485 aaKnown RBP11.5□□□□□ -0.57
SCFD2-202ENST00000401642 KLC2Q9H0B6 622 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 ARHGEF3Q9NR81 526 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 WDR27A2RRH5 827 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 GOLGA8TH3BQL2 631 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 GABBR2O75899 941 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 ZWINTO95229 277 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 CSH1P0DML2 217 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 CSH2P0DML3 217 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 RARBP10826 455 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 MCF2P10911 925 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 GJA5P36382 358 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 ALDH18A1P54886 795 aaKnown RBP11.5□□□□□ -0.57
SCFD2-202ENST00000401642 HDAC4P56524 1084 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 TNFAIP2Q03169 654 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 MOGSQ13724 837 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 CCDC6Q16204 474 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 BANPQ8N9N5 519 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 FAM13CQ8NE31 585 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 OR6J1Q8NGC5 347 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 DNAJB3Q8WWF6 145 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 NOP53Q9NZM5 478 aaKnown RBP11.5□□□□□ -0.57
SCFD2-202ENST00000401642 ACTL7BQ9Y614 415 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 PSME4Q14997 1843 aa11.5□□□□□ -0.57
SCFD2-202ENST00000401642 DCTN3O75935 186 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 RECQL4O94761 1208 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 T-ENOLP0DO92 83 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 AP1ARQ63HQ0 302 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 CYP4V2Q6ZWL3 525 aaPredicted RBP11.49□□□□□ -0.57
SCFD2-202ENST00000401642 RELL1Q8IUW5 271 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 MICAL1Q8TDZ2 1067 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 MCUR1Q96AQ8 359 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 GRAMD1AQ96CP6 724 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 MOCOSQ96EN8 888 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 MED10Q9BTT4 135 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 USP29Q9HBJ7 922 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.49□□□□□ -0.57
SCFD2-202ENST00000401642 UBP1Q9NZI7 540 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 SENP1Q9P0U3 644 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 MCM8Q9UJA3 840 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 GJD2Q9UKL4 321 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 AP4E1Q9UPM8 1137 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 DOCK1Q14185 1865 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
SCFD2-202ENST00000401642 TRIP11Q15643 1979 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 HAUS5O94927 633 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 GM2AP17900 193 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 SERPINB4P48594 390 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 ENPEPQ07075 957 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 SPNS2Q8IVW8 549 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 RSRC1Q96IZ7 334 aaKnown RBP11.49□□□□□ -0.57
SCFD2-202ENST00000401642 TBCBQ99426 244 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 SNX25Q9H3E2 840 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 G3BP2Q9UN86 482 aaKnown RBP11.49□□□□□ -0.57
SCFD2-202ENST00000401642 PDHXO00330 501 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 KIF3CO14782 793 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 GYG2O15488 501 aa11.49□□□□□ -0.57
SCFD2-202ENST00000401642 GAS2O43903 313 aaKnown RBP11.49□□□□□ -0.57
SCFD2-202ENST00000401642 LYPLA1O75608 230 aaPredicted RBP11.49□□□□□ -0.57
SCFD2-202ENST00000401642 STIP1P31948 543 aaKnown RBP11.49□□□□□ -0.57
SCFD2-202ENST00000401642 GNL1P36915 607 aaPredicted RBP11.49□□□□□ -0.57
SCFD2-202ENST00000401642 BEX3Q00994 111 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms