RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 RBBP8NLQ8NC74 664 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-203ENST00000400772 SLC35F5Q8WV83 523 aa16.64■□□□□ 0.25
ATG4B-203ENST00000400772 GAB3Q8WWW8 586 aa16.64■□□□□ 0.25
ATG4B-203ENST00000400772 CNOT6LQ96LI5 555 aaKnown RBP16.64■□□□□ 0.25
ATG4B-203ENST00000400772 CDK5RAP1Q96SZ6 601 aaKnown RBP16.64■□□□□ 0.25
ATG4B-203ENST00000400772 PARD6AQ9NPB6 346 aa16.64■□□□□ 0.25
ATG4B-203ENST00000400772 MARK1Q9P0L2 795 aa16.64■□□□□ 0.25
ATG4B-203ENST00000400772 EBF1Q9UH73 591 aa16.64■□□□□ 0.25
ATG4B-203ENST00000400772 RASAL2Q9UJF2 1139 aa16.64■□□□□ 0.25
ATG4B-203ENST00000400772 LSM7Q9UK45 103 aaKnown RBP16.64■□□□□ 0.25
ATG4B-203ENST00000400772 HCN2Q9UL51 889 aa16.64■□□□□ 0.25
ATG4B-203ENST00000400772 RAB23Q9ULC3 237 aa16.64■□□□□ 0.25
ATG4B-203ENST00000400772 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.64■□□□□ 0.25
ATG4B-203ENST00000400772 CNTN6Q9UQ52 1028 aa16.64■□□□□ 0.25
ATG4B-203ENST00000400772 FRYLO94915 3013 aa16.64■□□□□ 0.25
ATG4B-203ENST00000400772 YJEFN3A6XGL0 299 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-203ENST00000400772 E7ENQ6 273 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 APBB3O95704 486 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 HMBSP08397 361 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 SETSIPP0DME0 302 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 HNRNPLP14866 589 aaKnown RBP eCLIP16.63■□□□□ 0.25
ATG4B-203ENST00000400772 TIE1P35590 1138 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 TNFRSF4P43489 277 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 COG7P83436 770 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 ADIGQ0VDE8 80 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 BTBD8Q5XKL5 378 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 PMF1Q6P1K2 205 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 TMEM92Q6UXU6 159 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 SCML4Q8N228 414 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 FAM160A2Q8N612 972 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-203ENST00000400772 ALLCQ8N6M5 410 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 IL17RCQ8NAC3 791 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 SECISBP2LQ93073 1101 aaKnown RBP16.63■□□□□ 0.25
ATG4B-203ENST00000400772 LRRC4Q9HBW1 653 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 ZDHHC4Q9NPG8 344 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 LMBRD1Q9NUN5 540 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 DEC1Q9P2X7 70 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 GMEB2Q9UKD1 530 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 MMP17Q9ULZ9 603 aa16.63■□□□□ 0.25
ATG4B-203ENST00000400772 TBC1D3BA6NDS4 549 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 SGK1O00141 431 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 AXIN1O15169 862 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 CACNG3O60359 315 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 ADAM23O75077 832 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 RPP40O75818 363 aaKnown RBP16.62■□□□□ 0.25
ATG4B-203ENST00000400772 KLF8O95600 359 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-203ENST00000400772 RETP07949 1114 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 TYRP14679 529 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 RGS7P49802 495 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 APBA1Q02410 837 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 CRY1Q16526 586 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 CEP68Q76N32 757 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 KBTBD6Q86V97 674 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 CREBRFQ8IUR6 639 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 TXNDC5Q8NBS9 432 aaKnown RBP16.62■□□□□ 0.25
ATG4B-203ENST00000400772 RMDN1Q96DB5 314 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 CRACR2AQ9BSW2 395 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 BBS2Q9BXC9 721 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 UBE2TQ9NPD8 197 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-203ENST00000400772 MARCH2Q9P0N8 246 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 EML5Q05BV3 1969 aa16.62■□□□□ 0.25
ATG4B-203ENST00000400772 ZNF292O60281 2723 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 SLC12A8A0AV02 714 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 NEDD8-MDP1E9PL57 170 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 M0QYV0 167 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 PIK3R2O00459 728 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 CISD3P0C7P0 127 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 LCP1P13796 627 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 SLC9A1P19634 815 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 CORO1AP31146 461 aaKnown RBP16.61■□□□□ 0.25
ATG4B-203ENST00000400772 ID4P47928 161 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 DAOAP59103 153 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 STILQ15468 1287 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 DPCR1Q3MIW9 517 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 BSPRYQ5W0U4 402 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 GJB7Q6PEY0 223 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 RSRC2Q7L4I2 434 aaKnown RBP16.61■□□□□ 0.25
ATG4B-203ENST00000400772 RASSF3Q86WH2 238 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 GPR161Q8N6U8 529 aaKnown RBP16.61■□□□□ 0.25
ATG4B-203ENST00000400772 TERB1Q8NA31 727 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 TSTD1Q8NFU3 115 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 IPO9Q96P70 1041 aaKnown RBP16.61■□□□□ 0.25
ATG4B-203ENST00000400772 CNGB3Q9NQW8 809 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 WDR35Q9P2L0 1181 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 FBXO10Q9UK96 956 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 AGO1Q9UL18 857 aaKnown RBP16.61■□□□□ 0.25
ATG4B-203ENST00000400772 ZNF510Q9Y2H8 683 aa16.61■□□□□ 0.25
ATG4B-203ENST00000400772 MYO18AQ92614 2054 aaKnown RBP16.6■□□□□ 0.25
ATG4B-203ENST00000400772 DCLK1O15075 740 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 GPD2P43304 727 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 SPEM2Q0P670 501 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 HSF5Q4G112 596 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-203ENST00000400772 TRIM65Q6PJ69 517 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 TOGARAM2Q6ZUX3 1019 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 CACNA2D4Q7Z3S7 1137 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.6■□□□□ 0.25
ATG4B-203ENST00000400772 DENND1CQ8IV53 801 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 FMNL3Q8IVF7 1028 aa16.6■□□□□ 0.25
ATG4B-203ENST00000400772 SIX6OS1Q8N1H7 587 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms